RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MKRN2Q9H000 416 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 CCSER2Q9H7U1 834 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 PDE11AQ9HCR9 933 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 RBAKQ9NYW8 714 aaPredicted RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 USP36Q9P275 1121 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHD4-212ENST00000545083 SH3BP1Q9Y3L3 701 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 NFE2L3Q9Y4A8 694 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 A0A1B0GVT2 93 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 PLK4O00444 970 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 CLDN5O00501 218 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 BCAT2O15382 392 aaPredicted RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 GREM1O60565 184 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 HMGN5P82970 282 aaKnown RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 POSTNQ15063 836 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 MAPRE1Q15691 268 aaKnown RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 FUT11Q495W5 492 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 PREPLQ4J6C6 727 aaPredicted RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 DCAF12L1Q5VU92 463 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 TDRD10Q5VZ19 366 aaKnown RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 SDE2Q6IQ49 451 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 PCSK4Q6UW60 755 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 DHRS13Q6UX07 377 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 DPH6Q7L8W6 267 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 METTL3Q86U44 580 aaKnown RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 SFR1Q86XK3 245 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 FAM184AQ8NB25 1140 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 OR5B17Q8NGF7 314 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 HPDLQ96IR7 371 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 SLITRK1Q96PX8 696 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 DUSP9Q99956 384 aaKnown RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 CBWD1Q9BRT8 395 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 EHD2Q9NZN4 543 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 CHORDC1Q9UHD1 332 aaPredicted RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 EIF2B4Q9UI10 523 aaKnown RBP9.98□□□□□ -0.81
CHD4-212ENST00000545083 LIMCH1Q9UPQ0 1083 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 PCDHGB2Q9Y5G2 931 aa9.98□□□□□ -0.81
CHD4-212ENST00000545083 METTL12A8MUP2 240 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 NEDD8-MDP1E9PL57 170 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 CACNG3O60359 315 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 TMEM191BP0C7N4 346 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 CISD3P0C7P0 127 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 TYRP14679 529 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 ABCD1P33897 745 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 DDIT3P35638 169 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 EIF2S3P41091 472 aaKnown RBP9.97□□□□□ -0.81
CHD4-212ENST00000545083 CSNK1EP49674 416 aaKnown RBP9.97□□□□□ -0.81
CHD4-212ENST00000545083 PGFP49763 221 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 GRIN1Q05586 938 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 KIF19Q2TAC6 998 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 IL27RAQ6UWB1 636 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 HS2ST1Q7LGA3 356 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 NUP93Q8N1F7 819 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 CADM4Q8NFZ8 388 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 SCAMP5Q8TAC9 235 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 SCFD1Q8WVM8 642 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 FBXO32Q969P5 355 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 DPEP3Q9H4B8 488 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 ITM2CQ9NQX7 267 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 INTS13Q9NVM9 706 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 GMIPQ9P107 970 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 SNX11Q9Y5W9 270 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 STON1Q9Y6Q2 735 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 ATMQ13315 3056 aa9.97□□□□□ -0.81
CHD4-212ENST00000545083 GFRA2O00451 464 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 KCNK3O14649 394 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 SLC26A4O43511 780 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 TNFSF14O43557 240 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 HLA-EP13747 358 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 YWHAQP27348 245 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 TPMTP51580 245 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 CASP5P51878 434 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 RILPL1Q5EBL4 403 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 HECTD3Q5T447 861 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 SNX30Q5VWJ9 437 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 ARL6IP4Q66PJ3 421 aaKnown RBP9.96□□□□□ -0.82
CHD4-212ENST00000545083 LAYNQ6UX15 382 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 TPGS1Q6ZTW0 290 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 HTR3DQ70Z44 454 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 DYMQ7RTS9 669 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 CACUL1Q86Y37 369 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 LSM14AQ8ND56 463 aaKnown RBP9.96□□□□□ -0.82
CHD4-212ENST00000545083 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 NOC3LQ8WTT2 800 aaKnown RBP9.96□□□□□ -0.82
CHD4-212ENST00000545083 LARP4BQ92615 738 aaKnown RBP9.96□□□□□ -0.82
CHD4-212ENST00000545083 BHMTQ93088 406 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 HVCN1Q96D96 273 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 CALML4Q96GE6 196 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 FCRL3Q96P31 734 aaPredicted RBP9.96□□□□□ -0.82
CHD4-212ENST00000545083 KCNK16Q96T55 309 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 MMS19Q96T76 1030 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 BBS2Q9BXC9 721 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 B3GNT5Q9BYG0 378 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 FGFBP2Q9BYJ0 223 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 PCIF1Q9H4Z3 704 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 IL37Q9NZH6 218 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 MARK1Q9P0L2 795 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 TBC1D7Q9P0N9 293 aa9.96□□□□□ -0.82
CHD4-212ENST00000545083 MUC22E2RYF6 1773 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms