RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 FMO5P49326 533 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 PDE6CP51160 858 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 VCPP55072 806 aaKnown RBP7.81□□□□□ -1.16
CPSF7-224ENST00000544990 STARD6P59095 220 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 YWHAEP62258 255 aaKnown RBP7.81□□□□□ -1.16
CPSF7-224ENST00000544990 INCA1Q0VD86 236 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 GRM2Q14416 872 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 MLF2Q15773 248 aaPredicted RBP7.81□□□□□ -1.16
CPSF7-224ENST00000544990 TPD52L1Q16890 204 aaPredicted RBP7.81□□□□□ -1.16
CPSF7-224ENST00000544990 CBWD6Q4V339 395 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 ARHGAP29Q52LW3 1261 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 CBWD3Q5JTY5 395 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 CBWD5Q5RIA9 395 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 TXNDC8Q6A555 127 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 LRRC69Q6ZNQ3 347 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 TMEM150AQ86TG1 271 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 FAM35AQ86V20 835 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 ATCAYQ86WG3 371 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 NUP93Q8N1F7 819 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 STKLD1Q8NE28 680 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 BPIFB1Q8TDL5 484 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 CSGALNACT1Q8TDX6 532 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 SEMA4DQ92854 862 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 SLC35C1Q96A29 364 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 FAM122AQ96E09 287 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 CYFIP2Q96F07 1278 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 SLITRK1Q96PX8 696 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 NELL2Q99435 816 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 DUSP9Q99956 384 aaKnown RBP7.81□□□□□ -1.16
CPSF7-224ENST00000544990 SLC46A2Q9BY10 475 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 ZNF518BQ9C0D4 1074 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 IRF2BPLQ9H1B7 796 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 TBC1D17Q9HA65 648 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 KIF9Q9HAQ2 790 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 APOBEC3GQ9HC16 384 aaKnown RBP7.81□□□□□ -1.16
CPSF7-224ENST00000544990 DMAP1Q9NPF5 467 aaPredicted RBP7.81□□□□□ -1.16
CPSF7-224ENST00000544990 ATP13A2Q9NQ11 1180 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 TRPV5Q9NQA5 729 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 LMBRD1Q9NUN5 540 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 TDP1Q9NUW8 608 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 COMMD8Q9NX08 183 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 TRPM5Q9NZQ8 1165 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 DACH1Q9UI36 760 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 RWDD2AQ9UIY3 292 aa7.81□□□□□ -1.16
CPSF7-224ENST00000544990 MRPS17Q9Y2R5 130 aaKnown RBP7.81□□□□□ -1.16
CPSF7-224ENST00000544990 MIA3Q5JRA6 1907 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 TRAV19A0A0A6YYK7 116 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 A0A1W2PNR3 127 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 KANSL1LA0AUZ9 987 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 MAN2B1O00754 1011 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 NCAM2O15394 837 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 LRRN2O75325 713 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 CKMP06732 381 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 USP17L7P0C7H9 530 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 FAM200BP0CF97 657 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 GLULP15104 373 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 EPB42P16452 691 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 HDCP19113 662 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 TBXAS1P24557 533 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 YWHAQP27348 245 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 MLLT6P55198 1093 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 FCHO2Q0JRZ9 810 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 IFRD2Q12894 506 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 ZNF268Q14587 947 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 EFHC2Q5JST6 749 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 CWF19L1Q69YN2 538 aaKnown RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 CC2D1AQ6P1N0 951 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 C1orf228Q6PIY5 440 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 ZNF852Q6ZMS4 543 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 CREBRFQ8IUR6 639 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 FUKQ8N0W3 1084 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 C12orf29Q8N999 325 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 PDZD8Q8NEN9 1154 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 SLC2A14Q8TDB8 520 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 HEXIM2Q96MH2 286 aaKnown RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 NT5C1BQ96P26 610 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 KCNK16Q96T55 309 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 HNRNPABQ99729 332 aaKnown RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 TTLL2Q9BWV7 592 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 GPAMQ9HCL2 828 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 TRPC7Q9HCX4 862 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 HEBP1Q9NRV9 189 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 CISHQ9NSE2 258 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 FAM49BQ9NUQ9 324 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 RAPGEFL1Q9UHV5 662 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 FNDC3AQ9Y2H6 1198 aaKnown RBP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 SIT1Q9Y3P8 196 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPSF7-224ENST00000544990 ZNF318Q5VUA4 2279 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 TICRRQ7Z2Z1 1910 aa7.8□□□□□ -1.16
CPSF7-224ENST00000544990 PI15O43692 258 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 TADA3O75528 432 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 PRAMEF12O95522 483 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 AFPP02771 609 aaKnown RBP7.79□□□□□ -1.16
CPSF7-224ENST00000544990 CCDC130P13994 396 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 ERCC5P28715 1186 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-224ENST00000544990 ADORA2BP29275 332 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 IDH3AP50213 366 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 ARSDP51689 593 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 KPNA1P52294 538 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms