RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SIX6OS1Q8N1H7 587 aa12.42□□□□□ -0.42
HDAC4-216ENST00000544989 SCML4Q8N228 414 aa12.42□□□□□ -0.42
HDAC4-216ENST00000544989 KCTD13Q8WZ19 329 aa12.42□□□□□ -0.42
HDAC4-216ENST00000544989 NELL1Q92832 810 aa12.42□□□□□ -0.42
HDAC4-216ENST00000544989 ZFRQ96KR1 1074 aaKnown RBP12.42□□□□□ -0.42
HDAC4-216ENST00000544989 LINC00597Q9H2U6 94 aa12.42□□□□□ -0.42
HDAC4-216ENST00000544989 OLA1Q9NTK5 396 aaKnown RBP12.42□□□□□ -0.42
HDAC4-216ENST00000544989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDAC4-216ENST00000544989 STRIP2Q9ULQ0 834 aa12.42□□□□□ -0.42
HDAC4-216ENST00000544989 OTOGLQ3ZCN5 2332 aa12.42□□□□□ -0.42
HDAC4-216ENST00000544989 CFAP47Q6ZTR5 3102 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 PRR23AA6NEV1 266 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 OTOL1A6NHN0 477 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-216ENST00000544989 CHURC1-FNTBB4DL54 471 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 LMNAP02545 664 aaKnown RBP12.41□□□□□ -0.42
HDAC4-216ENST00000544989 GALK1P51570 392 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 TKTL1P51854 596 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 GAD2Q05329 585 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 DHCR24Q15392 516 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 DPCR1Q3MIW9 517 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 BTBD8Q5XKL5 378 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 PM20D1Q6GTS8 502 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 FSTL4Q6MZW2 842 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 TRIM65Q6PJ69 517 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 ASCL5Q7RTU5 278 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 TTC30AQ86WT1 665 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 RBBP8NLQ8NC74 664 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-216ENST00000544989 ZBTB44Q8NCP5 570 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 ACDQ96AP0 544 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 HSFY1Q96LI6 401 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 KLF16Q9BXK1 252 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-216ENST00000544989 DCLK3Q9C098 648 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 UBE2TQ9NPD8 197 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-216ENST00000544989 CNGB3Q9NQW8 809 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 APEX2Q9UBZ4 518 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC4-216ENST00000544989 CNTN6Q9UQ52 1028 aa12.41□□□□□ -0.42
HDAC4-216ENST00000544989 SART1O43290 800 aaKnown RBP12.4□□□□□ -0.42
HDAC4-216ENST00000544989 FBXO21O94952 628 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 CYP17A1P05093 508 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 TPM2P07951 284 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 ADH5P11766 374 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 KRT5P13647 590 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 EEF1GP26641 437 aaKnown RBP12.4□□□□□ -0.42
HDAC4-216ENST00000544989 CNR2P34972 360 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 ZNF132P52740 706 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 YWHAGP61981 247 aaKnown RBP eCLIP12.4□□□□□ -0.42
HDAC4-216ENST00000544989 PDE4CQ08493 712 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 HSF5Q4G112 596 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-216ENST00000544989 RBM43Q6ZSC3 357 aaKnown RBP12.4□□□□□ -0.42
HDAC4-216ENST00000544989 RSRC2Q7L4I2 434 aaKnown RBP12.4□□□□□ -0.42
HDAC4-216ENST00000544989 IRGQQ8WZA9 623 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 GOLGA1Q92805 767 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 SECISBP2LQ93073 1101 aaKnown RBP12.4□□□□□ -0.42
HDAC4-216ENST00000544989 TRIM62Q9BVG3 475 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 SPHK2Q9NRA0 654 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 RBM12Q9NTZ6 932 aaKnown RBP12.4□□□□□ -0.42
HDAC4-216ENST00000544989 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 COL4A3Q01955 1670 aa12.4□□□□□ -0.42
HDAC4-216ENST00000544989 CCDC163A0A0D9SF12 145 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 M0QYV0 167 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 HOXC11O43248 304 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-216ENST00000544989 APODP05090 189 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 TDGF1P13385 188 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 CHKAP35790 457 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 GRIA2P42262 883 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 ACADSBP45954 432 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 PKDCCQ504Y2 493 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 RHBDF2Q6PJF5 856 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 SASS6Q6UVJ0 657 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 SCD5Q86SK9 330 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 IRF2BP1Q8IU81 584 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 ARHGEF19Q8IW93 802 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 CAMKK1Q8N5S9 505 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 ENOX1Q8TC92 643 aaKnown RBP12.39□□□□□ -0.43
HDAC4-216ENST00000544989 RNF139Q8WU17 664 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 SLC35F5Q8WV83 523 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 CHFRQ96EP1 664 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
HDAC4-216ENST00000544989 MED15Q96RN5 788 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 PNKPQ96T60 521 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 TUBGCP2Q9BSJ2 902 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 NDST4Q9H3R1 872 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 NMUR1Q9HB89 426 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 ABCC13Q9NSE7 274 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 ANO10Q9NW15 660 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 OSER1Q9NX31 292 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 SLC8A2Q9UPR5 921 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 R4GN57 208 aa12.39□□□□□ -0.43
HDAC4-216ENST00000544989 MYO16Q9Y6X6 1858 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 A0A0A0MRY4 1105 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 LILRB5O75023 590 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 RNF40O75150 1001 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 TBX18O95935 607 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 EGFP01133 1207 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 IRF1P10914 325 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 PON1P27169 355 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 OPRD1P41143 372 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms