RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 UVRAGQ9P2Y5 699 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 PLA2G4CQ9UP65 541 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 HBS1LQ9Y450 684 aaKnown RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 KIAA1671Q9BY89 1806 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 A0A088AWK7 358 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 MYMKA6NI61 221 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 SOBPA7XYQ1 873 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 RASA4BC9J798 803 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TP73O15350 636 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 RASA4O43374 803 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TYROBPO43914 113 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 SERPINB7O75635 380 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 RPL17P18621 184 aaKnown RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 CCND2P30279 289 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 GALCP54803 685 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 NR1H2P55055 460 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TUBA4AP68366 448 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 GRB10Q13322 594 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 SPCS2Q15005 226 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 EPHA7Q15375 998 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 CCL14Q16627 93 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 MFSD14CQ5VZR4 134 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 MAEAQ7L5Y9 396 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 DHDDSQ86SQ9 333 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 LRRC6Q86X45 466 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 SLC13A5Q86YT5 568 aaPredicted RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 BRSK2Q8IWQ3 736 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 CCDC105Q8IYK2 499 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 VPS52Q8N1B4 723 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 PPTC7Q8NI37 304 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TMEM174Q8WUU8 243 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 BHMTQ93088 406 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 MTMR9Q96QG7 549 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 CCT7Q99832 543 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 MKNK1Q9BUB5 465 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TGIF2Q9GZN2 237 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 ZCWPW1Q9H0M4 648 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 CPVLQ9H3G5 476 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 PSTPIP2Q9H939 334 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 KCNK9Q9NPC2 374 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 HESX1Q9UBX0 185 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 CNOT11Q9UKZ1 510 aaKnown RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 NAALADL1Q9UQQ1 740 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TTLL3Q9Y4R7 772 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 PCDHA2Q9Y5H9 948 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 ATG2AQ2TAZ0 1938 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 IGSF9BQ9UPX0 1349 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 FAM221BA6H8Z2 402 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 MOXD2PA6NHM9 499 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 CCNT2O60583 730 aaKnown RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 RNASEH1O60930 286 aaKnown RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 LRRN2O75325 713 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 SPAG7O75391 227 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TNFAIP8O95379 198 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 AKR1A1P14550 325 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 FGFR4P22455 802 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 ACAT1P24752 427 aaKnown RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 PSMA3P25788 255 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 IVDP26440 423 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 CCT8P50990 548 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 HDAC4P56524 1084 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 NUP107P57740 925 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 ADAM17P78536 824 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 PPP2R5CQ13362 524 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 LRRC14Q15048 493 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TMEM266Q2M3C6 531 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 GRAMD4Q6IC98 578 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 DUS1LQ6P1R4 473 aaKnown RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 CFAP161Q6P656 301 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 SYT2Q8N9I0 419 aaPredicted RBP5.47□□□□□ -1.53
USP28-213ENST00000544967 TERB1Q8NA31 727 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 IL31RAQ8NI17 732 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 SLC35G2Q8TBE7 412 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 PYROXD1Q8WU10 500 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TAAR1Q96RJ0 339 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 STK33Q9BYT3 514 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 KLHL4Q9C0H6 718 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 C6orf50Q9HD87 102 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 SIX2Q9NPC8 291 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TAS2R1Q9NYW7 299 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 NINJ2Q9NZG7 142 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 CHMP2BQ9UQN3 213 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TRIM17Q9Y577 477 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 UBE4BO95155 1302 aa5.47□□□□□ -1.53
USP28-213ENST00000544967 TTLL13PA6NNM8 815 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 LSM1O15116 133 aaKnown RBP5.46□□□□□ -1.53
USP28-213ENST00000544967 LYPLA2O95372 231 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 UBTFL6P0CB48 400 aaPredicted RBP5.46□□□□□ -1.53
USP28-213ENST00000544967 CCL5P13501 91 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 ALOX15P16050 662 aaPredicted RBP5.46□□□□□ -1.53
USP28-213ENST00000544967 ITGB5P18084 799 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 PON1P27169 355 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 NOS2P35228 1153 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 SOX5P35711 763 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 PPARGP37231 505 aaPredicted RBP5.46□□□□□ -1.53
USP28-213ENST00000544967 RNASE9P60153 205 aaKnown RBP5.46□□□□□ -1.53
USP28-213ENST00000544967 CNTN2Q02246 1040 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 KCNH2Q12809 1159 aa5.46□□□□□ -1.53
USP28-213ENST00000544967 LPIN1Q14693 890 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms