RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ASPMQ8IZT6 3477 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-209ENST00000544610 MYBPHLA2RUH7 354 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 MTMR11A4FU01 709 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 OR6C75A6NL08 312 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 LRRC53A6NM62 1247 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 CHURC1-FNTBB4DL54 471 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 SPECC1L-ADORA2AF8WAN1 911 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 KIF2AO00139 706 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-209ENST00000544610 EPHB6O15197 1021 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 ZSCAN12O43309 604 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 FOXD2O60548 495 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-209ENST00000544610 RNF40O75150 1001 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 KRT37O76014 449 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 FGF19O95750 216 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 NFICP08651 508 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 FBXO45P0C2W1 286 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 OR4Q2P0C623 313 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 GZMAP12544 262 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 TYMPP19971 482 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 WEE1P30291 646 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 HOXA6P31267 233 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 CTHP32929 405 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 SOX9P48436 509 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 FNTBP49356 437 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 KPNA1P52294 538 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-209ENST00000544610 EPHB3P54753 998 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 DUSP4Q13115 394 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 CUL2Q13617 745 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 CCINQ13939 588 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 SIM2Q14190 667 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-209ENST00000544610 DRAP1Q14919 205 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-209ENST00000544610 SLC18A3Q16572 532 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 ASTE1Q2TB18 679 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-209ENST00000544610 SV2CQ496J9 727 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 ZNF667Q5HYK9 610 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 PPM1JQ5JR12 505 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 DGKKQ5KSL6 1271 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 STXBP5Q5T5C0 1151 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 HGSNATQ68CP4 663 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 TXNDC11Q6PKC3 985 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 TRIM72Q6ZMU5 477 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 PRR23CQ6ZRP0 262 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 Q6ZS52 159 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 GAREM2Q75VX8 874 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 RETREG3Q86VR2 466 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 YAF2Q8IY57 180 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 PPM1KQ8N3J5 372 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 TOP6BLQ8N6T0 577 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 UBR7Q8N806 425 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 KIAA1524Q8TCG1 905 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 SEMA4DQ92854 862 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 PSMG2Q969U7 264 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 HPDLQ96IR7 371 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 CCDC42Q96M95 316 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 LRRC3BQ96PB8 259 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 SYT11Q9BT88 431 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 ZNF518BQ9C0D4 1074 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 UBE2TQ9NPD8 197 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-209ENST00000544610 OBP2AQ9NY56 170 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 HSFX1Q9UBD0 423 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 DSEQ9UL01 958 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 ASB3Q9Y575 518 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 FHOD1Q9Y613 1164 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 TRIP11Q15643 1979 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 NCOR2Q9Y618 2525 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 WDFY3Q8IZQ1 3526 aa6.96□□□□□ -1.3
CDCA3-209ENST00000544610 TSC2P49815 1807 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 CEP250Q9BV73 2442 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 BTNL10A8MVZ5 291 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ZNF500O60304 480 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 NDUFA10O95299 355 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 PRAMEF12O95522 483 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 LSM8O95777 96 aaKnown RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 CST3P01034 146 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ITGB3P05106 788 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 CCDC175P0C221 793 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ODC1P11926 461 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ACO1P21399 889 aaKnown RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ALDH1A3P47895 512 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 TAF6P49848 677 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ZNF132P52740 706 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ADKP55263 362 aaKnown RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 WNT7BP56706 349 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 MYL6P60660 151 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 PTK2Q05397 1052 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 KLHL30Q0D2K2 578 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 SRSF5Q13243 272 aaKnown RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 TCEAL1Q15170 157 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ASIC2Q16515 512 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ARHGAP29Q52LW3 1261 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 C9orf57Q5W0N0 161 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 OVOS1Q6IE37 1185 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 DSTYKQ6XUX3 929 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 DNAJB7Q7Z6W7 309 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 WDR5BQ86VZ2 330 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ARID3BQ8IVW6 561 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 SYNPOQ8N3V7 929 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 FAM160A2Q8N612 972 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 TTC9BQ8N6N2 239 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms