RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 LENG8Q96PV6 779 aaPredicted RBP2.77□□□□□ -1.97
YBX3-214ENST00000544501 SNX18Q96RF0 628 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 WDR24Q96S15 920 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.77□□□□□ -1.97
YBX3-214ENST00000544501 PCDHAC1Q9H158 963 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 TMEM8AQ9HCN3 771 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 IL17RBQ9NRM6 502 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 SNX15Q9NRS6 342 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ASB6Q9NWX5 421 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 GAR1Q9NY12 217 aaKnown RBP2.77□□□□□ -1.97
YBX3-214ENST00000544501 TFCP2L1Q9NZI6 479 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 C11orf21Q9P2W6 132 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 MGAT4CQ9UBM8 478 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ADAM21Q9UKJ8 722 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ZMYND8Q9ULU4 1186 aaPredicted RBP2.77□□□□□ -1.97
YBX3-214ENST00000544501 LRCH1Q9Y2L9 728 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 PCDHGB2Q9Y5G2 931 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 GOLGA6L3A6NEY3 463 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 CES2O00748 559 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 FFAR2O15552 330 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 CBFA2T3O75081 653 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 WDR47O94967 919 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 VIPP01282 170 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 TMEM225BP0DP42 221 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 ADRA1DP25100 572 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 NTSR1P30989 418 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 EIF4A1P60842 406 aaKnown RBP2.76□□□□□ -1.97
YBX3-214ENST00000544501 GRM1Q13255 1194 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 BIRC2Q13490 618 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 FHL3Q13643 280 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 KRT72Q14CN4 511 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 RAB30Q15771 203 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 TRIM71Q2Q1W2 868 aaKnown RBP2.76□□□□□ -1.97
YBX3-214ENST00000544501 RAP1GAP2Q684P5 730 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 FCRLBQ6BAA4 426 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 PGBD2Q6P3X8 592 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 TRIM72Q6ZMU5 477 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 PTF1AQ7RTS3 328 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 ARHGEF25Q86VW2 580 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 MYLK4Q86YV6 388 aaPredicted RBP2.76□□□□□ -1.97
YBX3-214ENST00000544501 FSTL5Q8N475 847 aaPredicted RBP2.76□□□□□ -1.97
YBX3-214ENST00000544501 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.76□□□□□ -1.97
YBX3-214ENST00000544501 C11orf44Q8N8P7 122 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 PNPLA1Q8N8W4 532 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 TERB1Q8NA31 727 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 OVCA2Q8WZ82 227 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 REPS1Q96D71 796 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 DAZAP1Q96EP5 407 aaKnown RBP2.76□□□□□ -1.97
YBX3-214ENST00000544501 WDYHV1Q96HA8 205 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 RPS6KC1Q96S38 1066 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 MPHOSPH6Q99547 160 aaKnown RBP2.76□□□□□ -1.97
YBX3-214ENST00000544501 TTLL2Q9BWV7 592 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 WDR12Q9GZL7 423 aaKnown RBP2.76□□□□□ -1.97
YBX3-214ENST00000544501 R3HDMLQ9H3Y0 253 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 PRDM13Q9H4Q3 707 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 AS3MTQ9HBK9 375 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 PLCB1Q9NQ66 1216 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 HELLSQ9NRZ9 838 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 SLC39A10Q9ULF5 831 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 DTNAQ9Y4J8 743 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 COMMD10Q9Y6G5 202 aa2.76□□□□□ -1.97
YBX3-214ENST00000544501 AOX1Q06278 1338 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 SPATA31A6Q5VVP1 1343 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 LRRC3CA6NJW4 275 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 BTBD19C9JJ37 291 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 H3BNC9 293 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 ZSCAN9O15535 394 aaPredicted RBP2.75□□□□□ -1.97
YBX3-214ENST00000544501 PPFIA2O75334 1257 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 NTSR2O95665 410 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 C1RP00736 705 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 PECAM1P16284 738 aaPredicted RBP2.75□□□□□ -1.97
YBX3-214ENST00000544501 MMP8P22894 467 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 IL6STP40189 918 aaPredicted RBP2.75□□□□□ -1.97
YBX3-214ENST00000544501 PTH2RP49190 550 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 DIO1P49895 249 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 CYP4F2P78329 520 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 PSG6Q00889 435 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 CFHR3Q02985 330 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 TNFAIP2Q03169 654 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 LMAN2Q12907 356 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 MTAPQ13126 283 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 DNASE1L3Q13609 305 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 KCNJ12Q14500 433 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 STARD3Q14849 445 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 RNASE12Q5GAN4 147 aaKnown RBP2.75□□□□□ -1.97
YBX3-214ENST00000544501 TMTC4Q5T4D3 741 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 C1orf228Q6PIY5 440 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 KIRREL2Q6UWL6 708 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 NAPRTQ6XQN6 538 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 DPY19L3Q6ZPD9 716 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 RD3Q7Z3Z2 195 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 BCDIN3DQ7Z5W3 292 aaKnown RBP2.75□□□□□ -1.97
YBX3-214ENST00000544501 RASGRP3Q8IV61 690 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 CLASRPQ8N2M8 674 aaKnown RBP2.75□□□□□ -1.97
YBX3-214ENST00000544501 LINC01465Q8N7H1 131 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 C12orf76Q8N812 135 aaPredicted RBP2.75□□□□□ -1.97
YBX3-214ENST00000544501 ENAHQ8N8S7 591 aaPredicted RBP2.75□□□□□ -1.97
YBX3-214ENST00000544501 ZNF527Q8NB42 609 aa2.75□□□□□ -1.97
YBX3-214ENST00000544501 MUL1Q969V5 352 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms