RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	ARC	Q7LC44	396 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	DEFB128	Q7Z7B8	93 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	CPLX4	Q7Z7G2	160 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	TADA2B	Q86TJ2	420 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	TMEM110	Q86TL2	294 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	TTC30A	Q86WT1	665 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	MAP7D3	Q8IWC1	876 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	C10orf67	Q8IYJ2	551 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	NME8	Q8N427	588 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	OTUD6B	Q8N6M0	293 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	C7orf31	Q8N865	590 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	RSAD2	Q8WXG1	361 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	PPM1E	Q8WY54	764 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	HSPH1	Q92598	858 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	C9orf72	Q96LT7	481 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	PWWP2A	Q96N64	755 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	PEBP4	Q96S96	227 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	OSMR	Q99650	979 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	TMEM121	Q9BTD3	319 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	KATNAL1	Q9BW62	490 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	SLC28A3	Q9HAS3	691 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	CDHR5	Q9HBB8	845 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	UBN1	Q9NPG3	1134 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	GDAP2	Q9NXN4	497 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	TUBGCP4	Q9UGJ1	667 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	FETUB	Q9UGM5	382 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	PCSK1N	Q9UHG2	260 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	SNX9	Q9Y5X1	595 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	TSC2	P49815	1807 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	SCN10A	Q9Y5Y9	1956 aa		11.74	□□□□□ -0.53
LDHA-222	ENST00000543695	CFAP69	A5D8W1	941 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695		E7ESA3	106 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	PIR	O00625	290 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	PPEF2	O14830	753 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	TRIM66	O15016	1216 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	PRPSAP2	O60256	369 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	CD48	P09326	243 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	FAM163B	P0C2L3	166 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	TGM2	P21980	687 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	RPL22	P35268	128 aa	Known RBP	11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	PTPN9	P43378	593 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	CDH6	P55285	790 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	ARL4C	P56559	192 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	DYNLT1	P63172	113 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	BST2	Q10589	180 aa	Known RBP	11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	DPYSL3	Q14195	570 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	ITIH4	Q14624	930 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	CCDC14	Q49A88	953 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	KCNT1	Q5JUK3	1230 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	PMF1	Q6P1K2	205 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	DPH6	Q7L8W6	267 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	LIMS2	Q7Z4I7	341 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	ACOT1	Q86TX2	421 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	CRYBG2	Q8N1P7	616 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	NAT8L	Q8N9F0	302 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	PPP1R13L	Q8WUF5	828 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	SLC35F5	Q8WV83	523 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	RNF157	Q96PX1	679 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	GAS2L1	Q99501	681 aa	Predicted RBP	11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	MAK16	Q9BXY0	300 aa	Known RBP	11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	TRIM6	Q9C030	488 aa	Predicted RBP	11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	SENP1	Q9P0U3	644 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	SLC24A2	Q9UI40	661 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	NAALADL1	Q9UQQ1	740 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	NME7	Q9Y5B8	376 aa		11.73	□□□□□ -0.53
LDHA-222	ENST00000543695	TDRD15	B5MCY1	1934 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	EXOC1L	A0A1B0GW35	172 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	TMEM120B	A0PK00	339 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	C17orf102	A2RUQ5	167 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	MDM4	O15151	490 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	FSBP	O95073	299 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	PARN	O95453	639 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	IFNB1	P01574	187 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	RBP3	P10745	1247 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	BRAF	P15056	766 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	ATP2A2	P16615	1042 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	HOXC8	P31273	242 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	SDC4	P31431	198 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	STIP1	P31948	543 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	PHB	P35232	272 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	ACADSB	P45954	432 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CRYBB1	P53674	252 aa	Predicted RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	SLC18A1	P54219	525 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	BCAT1	P54687	386 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	ROR1	Q01973	937 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	TMEM62	Q0P6H9	643 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	KRT81	Q14533	505 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	HIF1A	Q16665	826 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	SV2C	Q496J9	727 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CCDC38	Q502W7	563 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	EFHC2	Q5JST6	749 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	UBXN11	Q5T124	520 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	PPP1R21	Q6ZMI0	780 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CCDC121	Q6ZUS5	278 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	PIGW	Q7Z7B1	504 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CCDC13	Q8IYE1	715 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	LRRC34	Q8IZ02	419 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	ATP11C	Q8NB49	1132 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CCDC197	Q8NCU1	140 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms