RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TTPALQ9BTX7 342 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 EIF2B3Q9NR50 452 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 NFU1Q9UMS0 254 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 IRS2Q9Y4H2 1338 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 WRNQ14191 1432 aaPredicted RBP eCLIP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 EPRSP07814 1512 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 ERICH3Q5RHP9 1530 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM90A20PA6NIJ5 464 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 SAC3D1A6NKF1 404 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 KIF28PB7ZC32 967 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 DCLK1O15075 740 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 SRGAP2O75044 1071 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 F9P00740 461 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ATXN1LP0C7T5 689 aaKnown RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 MAPK4P31152 587 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 GGT5P36269 586 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 MAGEA10P43363 369 aaPredicted RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 CDR1P51861 262 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 NPEPPSP55786 919 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ADAM8P78325 824 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 MPP3Q13368 585 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 MRPL49Q13405 166 aaKnown RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 MAMLD1Q13495 774 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 BOP1Q14137 746 aaKnown RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 BECN1Q14457 450 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 UBXN2BQ14CS0 331 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 WTAPQ15007 396 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 SEC23BQ15437 767 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ZIK1Q3SY52 487 aaPredicted RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ATF7IPQ6VMQ6 1270 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM43BQ6ZT52 329 aaPredicted RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 KRT74Q7RTS7 529 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 PRRT2Q7Z6L0 340 aaPredicted RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ZNF280BQ86YH2 543 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 TMEFF1Q8IYR6 380 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ADSSL1Q8N142 457 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 GALNT4Q8N4A0 578 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 FITM2Q8N6M3 262 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 OR14K1Q8NGZ2 314 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 FEZF2Q8TBJ5 459 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 KCNG4Q8TDN1 519 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ABHD5Q8WTS1 349 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 MZB1Q8WU39 189 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 CUL5Q93034 780 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ZBTB8AQ96BR9 441 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 RADILQ96JH8 1075 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ZNF668Q96K58 619 aaPredicted RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 PWWP2AQ96N64 755 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 NOX5Q96PH1 765 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 FUZQ9BT04 418 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 CARD11Q9BXL7 1154 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 ITPAQ9BY32 194 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 TXLNGYQ9BZA5 131 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 EPC1Q9H2F5 836 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 SYNCQ9H7C4 482 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 BARX1Q9HBU1 254 aaPredicted RBP4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 MRGBPQ9NV56 204 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 PLA2G3Q9NZ20 509 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 TBC1D14Q9P2M4 693 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 DNAJB11Q9UBS4 358 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 CAMK2AQ9UQM7 478 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 PNPLA7Q6ZV29 1317 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 MAP3K4Q9Y6R4 1608 aa4.34□□□□□ -1.71
SFSWAP-211ENST00000542813 SETD1BQ9UPS6 1966 aaKnown RBP4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 KIF21BO75037 1637 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 PTPRGP23470 1445 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 hCG_1807616A0A1W2PRN6 198 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 MASP2O00187 686 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 LARGE1O95461 756 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 CLEC3BP05452 202 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 APOA4P06727 396 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 LAMP2P13473 410 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF28P17035 718 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 PSMA4P25789 261 aaKnown RBP4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 LRPAP1P30533 357 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 IL13P35225 146 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 UBA7P41226 1012 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 CDK7P50613 346 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 LILRA4P59901 499 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 CALD1Q05682 793 aaKnown RBP4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 SF3A3Q12874 501 aaKnown RBP eCLIP4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 ACVR2BQ13705 512 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 CSHL1Q14406 222 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 CDC37Q16543 378 aaPredicted RBP4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF484Q5JVG2 852 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 FAM69AQ5T7M9 428 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 ANKS6Q68DC2 871 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 LAYNQ6UX15 382 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 SYNE3Q6ZMZ3 975 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 Q6ZUG5 572 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 USP30Q70CQ3 517 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 MED25Q71SY5 747 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 PXKQ7Z7A4 578 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 TRABD2AQ86V40 505 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 LDHDQ86WU2 507 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 CREBRFQ8IUR6 639 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 DNAJB14Q8TBM8 379 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 FNIP1Q8TF40 1166 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms