RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 WLSQ5T9L3 541 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 NOTUMQ6P988 496 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ALKAL1Q6UXT8 129 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 TBC1D1Q86TI0 1168 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ZC3H18Q86VM9 953 aaKnown RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 CHSY1Q86X52 802 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 PCDH19Q8TAB3 1148 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 C10orf82Q8WW14 230 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF75CPQ92670 426 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 CENPIQ92674 756 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 KLHL29Q96CT2 875 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ZMAT2Q96NC0 199 aaKnown RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 TACO1Q9BSH4 297 aaKnown RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ABHD16BQ9H3Z7 469 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 NGRNQ9NPE2 291 aaKnown RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SNTG2Q9NY99 539 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF180Q9UJW8 692 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 UBQLN1Q9UMX0 589 aaKnown RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 NME7Q9Y5B8 376 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SCN4AP35499 1836 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 IGF2BP3O00425 579 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 KCNN4O15554 427 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CREB3O43889 395 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GPR32O75388 356 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GRAP2O75791 330 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 IL1BP01584 269 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 C1QAP02745 245 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 DHRS4L1P0CG22 281 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF16P17020 682 aaPredicted RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 AXLP30530 894 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ALDH3A1P30838 453 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 NEK3P51956 506 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 BCAT1P54687 386 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 HDAC4P56524 1084 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ATP11AP98196 1134 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 BST2Q10589 180 aaKnown RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 PTK7Q13308 1070 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 RAB6CQ53S08 254 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 FYB2Q5VWT5 728 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 C9orf131Q5VYM1 1079 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 IQSEC1Q6DN90 963 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 C1orf228Q6PIY5 440 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CATSPER4Q7RTX7 472 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ANKRD23Q86SG2 305 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ACOT1Q86TX2 421 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 IGDCC3Q8IVU1 814 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CACTIN-AS1Q8N1I8 211 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SDR16C5Q8N3Y7 309 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF276Q8N554 614 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 OR6J1Q8NGC5 347 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SLC10A4Q96EP9 437 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 APOPT1Q96IL0 206 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 MAML3Q96JK9 1138 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF560Q96MR9 790 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 DNAI2Q9GZS0 605 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 RAB6CQ9H0N0 254 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 NOD2Q9HC29 1040 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CD248Q9HCU0 757 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SLCO1B3Q9NPD5 702 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 RAB6BQ9NRW1 208 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ETNK2Q9NVF9 386 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TUBGCP4Q9UGJ1 667 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GGT7Q9UJ14 662 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TRIP11Q15643 1979 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 KAT6AQ92794 2004 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SMIM35A0A1B0GVV1 85 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 MBLAC1A4D2B0 266 aaPredicted RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 PIK3R2O00459 728 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 C2CD2LO14523 706 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TRDMT1O14717 391 aaKnown RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 PPEF2O14830 753 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 F2P00734 622 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CD4P01730 458 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 MT-ND3P03897 115 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 INHBAP08476 426 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TPSB2P20231 275 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 PRKCHP24723 683 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ADRA1DP25100 572 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 PNPLA4P41247 253 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 MAGEA3P43357 314 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ACADSBP45954 432 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 NR2C2P49116 596 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GTF2A2P52657 109 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 KCNJ2P63252 427 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TPSAB1Q15661 275 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SEPT7Q16181 437 aaKnown RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 KIZQ2M2Z5 673 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 C9orf57Q5W0N0 161 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 DPY19L2Q6NUT2 758 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 RINLQ6ZS11 566 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SH2D5Q6ZV89 423 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 OTOAQ7RTW8 1153 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 LIMS2Q7Z4I7 341 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SLC26A11Q86WA9 606 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CRYBG2Q8N1P7 616 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ANKRD52Q8NB46 1076 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TCP10LQ8TDR4 215 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 MS4A4AQ96JQ5 239 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 HSFY1Q96LI6 401 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 LRRC37BQ96QE4 947 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms