RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 A0A1W2PRU2 124 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 SOBPA7XYQ1 873 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 ATMINO43313 823 aaPredicted RBP24.19■■□□□ 1.46
HOMER3-205ENST00000542541 DDX6P26196 483 aaKnown RBP eCLIP24.19■■□□□ 1.46
HOMER3-205ENST00000542541 TUBP50607 506 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 NTHL1P78549 312 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 TAF5Q15542 800 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 HECTD3Q5T447 861 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 HFE2Q6ZVN8 426 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 RHOT2Q8IXI1 618 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 KHSRPQ92945 711 aaKnown RBP eCLIP24.19■■□□□ 1.46
HOMER3-205ENST00000542541 TRIM44Q96DX7 344 aaPredicted RBP24.19■■□□□ 1.46
HOMER3-205ENST00000542541 NECTIN4Q96NY8 510 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 OLA1Q9NTK5 396 aaKnown RBP24.19■■□□□ 1.46
HOMER3-205ENST00000542541 CTTNBP2NLQ9P2B4 639 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 UVRAGQ9P2Y5 699 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 COG5Q9UP83 839 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 COL6A3P12111 3177 aa24.19■■□□□ 1.46
HOMER3-205ENST00000542541 GRAP2O75791 330 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 NCAM1P13591 858 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 RARGP13631 454 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 PFKLP17858 780 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 KCNA5P22460 613 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 KIF5AQ12840 1032 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 PRSS36Q5K4E3 855 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 PPP1R15BQ5SWA1 713 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 RSRC2Q7L4I2 434 aaKnown RBP24.18■■□□□ 1.46
HOMER3-205ENST00000542541 FEZF2Q8TBJ5 459 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 ARHGEF26Q96DR7 871 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.18■■□□□ 1.46
HOMER3-205ENST00000542541 PRUNE2Q8WUY3 3088 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 GREB1Q4ZG55 1949 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 CLUHO75153 1309 aa24.18■■□□□ 1.46
HOMER3-205ENST00000542541 TADA3O75528 432 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 DAB1O75553 588 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 FSHRP23945 695 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 CCR2P41597 374 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 MATKP42679 507 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 HS1BP3Q53T59 392 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 SHKBP1Q8TBC3 707 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 RFFLQ8WZ73 363 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 EDEM1Q92611 657 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 MCEEQ96PE7 176 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 SLC2A13Q96QE2 648 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 NUP85Q9BW27 656 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 OSER1Q9NX31 292 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 RRN3Q9NYV6 651 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.17■■□□□ 1.46
HOMER3-205ENST00000542541 STAP1Q9ULZ2 295 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 H3BQ06 376 aaPredicted RBP24.17■■□□□ 1.46
HOMER3-205ENST00000542541 PJA2O43164 708 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 TLR5O60602 858 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 DESP17661 470 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 NOS2P35228 1153 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 RFC1P35251 1148 aaPredicted RBP24.17■■□□□ 1.46
HOMER3-205ENST00000542541 PGFP49763 221 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 SLC5A9Q2M3M2 681 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 DCAF6Q58WW2 860 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 DEFB106AQ8N104 65 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 TCEAL4Q96EI5 215 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 NACA2Q9H009 215 aa24.17■■□□□ 1.46
HOMER3-205ENST00000542541 A0A0A6YYK5 440 aaPredicted RBP24.16■■□□□ 1.46
HOMER3-205ENST00000542541 FYNP06241 537 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 ATP5C1P36542 298 aaKnown RBP24.16■■□□□ 1.46
HOMER3-205ENST00000542541 TCEAL1Q15170 157 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 CLUL1Q15846 466 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 C10orf120Q5SQS8 335 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 KLHDC10Q6PID8 442 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 MAFAQ8NHW3 353 aaPredicted RBP24.16■■□□□ 1.46
HOMER3-205ENST00000542541 SLC35G2Q8TBE7 412 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 TSGA10Q9BZW7 698 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 TASP1Q9H6P5 420 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 LCMT1Q9UIC8 334 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 NAALADL1Q9UQQ1 740 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 PPP2R2CQ9Y2T4 447 aa24.16■■□□□ 1.46
HOMER3-205ENST00000542541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.16■■□□□ 1.46
HOMER3-205ENST00000542541 TMEM191CA6NGB0 347 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 BTNL10A8MVZ5 291 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 ZSCAN12O43309 604 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 PDGFRAP16234 1089 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 GJA1P17302 382 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 SDC4P31431 198 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 RPL7AP62424 266 aaKnown RBP24.15■■□□□ 1.46
HOMER3-205ENST00000542541 CYP4F8P98187 520 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 TEAD2Q15562 447 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 GPR158Q5T848 1215 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 TXNDC8Q6A555 127 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 JOSD2Q8TAC2 188 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 ZNF564Q8TBZ8 553 aaPredicted RBP24.15■■□□□ 1.46
HOMER3-205ENST00000542541 CALR3Q96L12 384 aaKnown RBP24.15■■□□□ 1.46
HOMER3-205ENST00000542541 DDX23Q9BUQ8 820 aaKnown RBP24.15■■□□□ 1.46
HOMER3-205ENST00000542541 TRPC7Q9HCX4 862 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 TMEM51Q9NW97 253 aa24.15■■□□□ 1.46
HOMER3-205ENST00000542541 RCCD1A6NED2 376 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 C2CD4BA6NLJ0 364 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 KRT86O43790 486 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 MOSPD3O75425 235 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 GJB6O95452 261 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 OAS1P00973 400 aaKnown RBP24.14■■□□□ 1.46
HOMER3-205ENST00000542541 HDCP19113 662 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms