RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PEBP4Q96S96 227 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CYTH2Q99418 400 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 GPR20Q99678 358 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TCHPQ9BT92 498 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TBC1D10AQ9BXI6 508 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 NFKBIZQ9BYH8 718 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ELOVL4Q9GZR5 314 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CDT1Q9H211 546 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM124BQ9H5Z6 455 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 MANSC1Q9H8J5 431 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 C10orf88Q9H8K7 445 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 KCNK13Q9HB14 408 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CYP3A43Q9HB55 503 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 USP29Q9HBJ7 922 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 METTL5Q9NRN9 209 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 DONSONQ9NYP3 566 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 BTBD7Q9P203 1132 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 NKX1-2Q9UD57 310 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 SEPT3Q9UH03 358 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 HAO1Q9UJM8 370 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 USP18Q9UMW8 372 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TNFSF13BQ9Y275 285 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 LRRC42Q9Y546 428 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PPP2R3BQ9Y5P8 575 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PTPRFP10586 1907 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 DICER1Q9UPY3 1922 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 IQANK1A0A1B0GTG1 560 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 TCRBV9S1A1TA0A576 114 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 C2CD4BA6NLJ0 364 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 LIN7AO14910 233 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 HGSO14964 777 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 MCF2LO15068 1137 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 MICAL2O94851 1124 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ARIH2O95376 493 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 CBX6O95503 412 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 STAU1O95793 577 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 HMGCRP04035 888 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 RPSAP08865 295 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 TPBGLP0DKB5 382 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 TROVE2P10155 538 aaKnown RBP eCLIP5.41□□□□□ -1.544e-8■■■■■ 72
ATPAF1-212ENST00000542495 RBP3P10745 1247 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 CD19P15391 556 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 IBSPP21815 317 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 MAPK1P28482 360 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ATICP31939 592 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 GCKP35557 465 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ELK3P41970 407 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 RAP1GAPP47736 663 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 CLNS1AP54105 237 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 HIRAP54198 1017 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 CDH8P55286 799 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 MBTD1Q05BQ5 628 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 POU5F1BQ06416 359 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 PRKD1Q15139 912 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 TAF5Q15542 800 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM187BQ17R55 369 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 BBS9Q3SYG4 887 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 TAF1BQ53T94 588 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF667Q5HYK9 610 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ANKRD20A2Q5SQ80 823 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 CELF3Q5SZQ8 465 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ANKRD20A1Q5TYW2 823 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ANGEL2Q5VTE6 544 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ANKRD20A3Q5VUR7 823 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 FYB2Q5VWT5 728 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 TRNP1Q6NT89 227 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 BZW1Q7L1Q6 419 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 LONP2Q86WA8 852 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 RFX6Q8HWS3 928 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 PALM2Q8IXS6 379 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 CEP120Q8N960 986 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 C1orf127Q8N9H9 656 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM71DQ8N9W8 422 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 KCTD6Q8NC69 237 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 RFWD2Q8NHY2 731 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 SKA1Q96BD8 255 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 TMEM176AQ96HP8 235 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 APOPT1Q96IL0 206 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 SERAC1Q96JX3 654 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 FGD4Q96M96 766 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 SPSB2Q99619 263 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 CNPY3Q9BT09 278 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 TUBB6Q9BUF5 446 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 FRMD8Q9BZ67 464 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 UNC93B1Q9H1C4 597 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 PLAC1Q9HBJ0 212 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 NPHS2Q9NP85 383 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ASNSD1Q9NWL6 643 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 MKS1Q9NXB0 559 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC17A7Q9P2U7 560 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 NXF1Q9UBU9 619 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ZFP69BQ9UJL9 534 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 DCTN4Q9UJW0 460 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF180Q9UJW8 692 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 FZD1Q9UP38 647 aa5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 DNMT3AQ9Y6K1 912 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-212ENST00000542495 ZSWIM8A7E2V4 1837 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 BCLAF3A2AJT9 711 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms