RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 MAPK13O15264 365 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 CILPO75339 1184 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 KRT37O76014 449 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 RHOBTB1O94844 696 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 ACO1P21399 889 aaKnown RBP20.98■□□□□ 0.95
DDX11-220ENST00000542244 NFIL3Q16649 462 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 USP39Q53GS9 565 aaKnown RBP20.98■□□□□ 0.95
DDX11-220ENST00000542244 PPP1R26Q5T8A7 1209 aaPredicted RBP20.98■□□□□ 0.95
DDX11-220ENST00000542244 TOGARAM2Q6ZUX3 1019 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 ARMCX6Q7L4S7 300 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 HMGB4Q8WW32 186 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 CIZ1Q9ULV3 898 aaPredicted RBP20.98■□□□□ 0.95
DDX11-220ENST00000542244 SCML2Q9UQR0 700 aa20.98■□□□□ 0.95
DDX11-220ENST00000542244 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 LNP1A1A4G5 178 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 TBC1D3BA6NDS4 549 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 C4orf47A7E2U8 309 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 ZNF202O95125 648 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 MYL1P05976 194 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 P2RY2P41231 377 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 PTGER3P43115 390 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 TNFRSF4P43489 277 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 ADAM9Q13443 819 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 MAP7D1Q3KQU3 841 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 C10orf76Q5T2E6 689 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 EGFLAMQ63HQ2 1017 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 RNF43Q68DV7 783 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 TPGS1Q6ZTW0 290 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 HTR3DQ70Z44 454 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 TMEFF1Q8IYR6 380 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 GUF1Q8N442 669 aaKnown RBP20.97■□□□□ 0.95
DDX11-220ENST00000542244 DEFB119Q8N690 84 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 ERCC4Q92889 916 aaPredicted RBP20.97■□□□□ 0.95
DDX11-220ENST00000542244 TATDN2Q93075 761 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 EDEM2Q9BV94 578 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 NT5C1AQ9BXI3 368 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 NIF3L1Q9GZT8 377 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 NACA2Q9H009 215 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 CYLDQ9NQC7 956 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 TLR8Q9NR97 1041 aaKnown RBP20.97■□□□□ 0.95
DDX11-220ENST00000542244 TMEM74BQ9NUR3 256 aa20.97■□□□□ 0.95
DDX11-220ENST00000542244 TPRP12270 2363 aaKnown RBP20.96■□□□□ 0.95
DDX11-220ENST00000542244 THADAQ6YHU6 1953 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 A0A1W2PQ27 194 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 A0A1W2PQ64 194 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 A0A1W2PQD8 194 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 TCRBV21S2A2A0A5A6 115 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 PRRT4C9JH25 899 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 FOXD2O60548 495 aaPredicted RBP20.96■□□□□ 0.95
DDX11-220ENST00000542244 RARGP13631 454 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 DHPSP49366 369 aaPredicted RBP20.96■□□□□ 0.95
DDX11-220ENST00000542244 PNOCQ13519 176 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 INTS8Q75QN2 995 aaKnown RBP20.96■□□□□ 0.95
DDX11-220ENST00000542244 TERB1Q8NA31 727 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 BHMTQ93088 406 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 OTUB2Q96DC9 234 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 LSM14BQ9BX40 385 aaKnown RBP20.96■□□□□ 0.95
DDX11-220ENST00000542244 FBXO44Q9H4M3 255 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 CD248Q9HCU0 757 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 CD93Q9NPY3 652 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.96■□□□□ 0.95
DDX11-220ENST00000542244 DEC1Q9P2X7 70 aa20.96■□□□□ 0.95
DDX11-220ENST00000542244 NEDD8-MDP1E9PL57 170 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 CDX4O14627 284 aaPredicted RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 KIF20AO95235 890 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 KLKB1P03952 638 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 PSMC2P35998 433 aaKnown RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 KIF11P52732 1056 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 PMS1P54277 932 aaKnown RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 MCCD1P59942 119 aaPredicted RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 IRX4P78413 519 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 KIAA1211LQ6NV74 962 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 ZNF513Q8N8E2 541 aaPredicted RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 NDRG1Q92597 394 aaKnown RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 PIGKQ92643 395 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 DUSP9Q99956 384 aaKnown RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 SLC6A17Q9H1V8 727 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 CYP3A43Q9HB55 503 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 TMEM8AQ9HCN3 771 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 FSCN3Q9NQT6 498 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 DNAJC17Q9NVM6 304 aaKnown RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 PLK2Q9NYY3 685 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 ATXN2Q99700 1313 aaKnown RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 CNOT1A5YKK6 2376 aaKnown RBP20.95■□□□□ 0.94
DDX11-220ENST00000542244 ACACBO00763 2458 aa20.95■□□□□ 0.94
DDX11-220ENST00000542244 MYH10P35580 1976 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 NUP205Q92621 2012 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 A0A1W2PQF6 199 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.94■□□□□ 0.94
DDX11-220ENST00000542244 KCNK5O95279 499 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 CISD3P0C7P0 127 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 KRT13P13646 458 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 TYRP14679 529 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 GABRG2P18507 467 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 ATP5C1P36542 298 aaKnown RBP20.94■□□□□ 0.94
DDX11-220ENST00000542244 EOGTQ5NDL2 527 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 BTBD8Q5XKL5 378 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 Q6ZNB5 142 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 SLC4A11Q8NBS3 891 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 CCDC26Q8TAB7 109 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms