RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 CHORDC1Q9UHD1 332 aaPredicted RBP12.87□□□□□ -0.35
KDM3A-216ENST00000542128 CPSF3Q9UKF6 684 aaKnown RBP12.87□□□□□ -0.35
KDM3A-216ENST00000542128 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 NEMP1O14524 444 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 ENO2P09104 434 aaPredicted RBP12.87□□□□□ -0.35
KDM3A-216ENST00000542128 SLC25A3Q00325 362 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 NRF1Q16656 503 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 TMEM214Q6NUQ4 689 aaKnown RBP12.87□□□□□ -0.35
KDM3A-216ENST00000542128 OTOAQ7RTW8 1153 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 DCLK2Q8N568 766 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 GSTCDQ8NEC7 633 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 TNIP2Q8NFZ5 429 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 EIF2AK1Q9BQI3 630 aaKnown RBP12.87□□□□□ -0.35
KDM3A-216ENST00000542128 CHID1Q9BWS9 393 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 MAGEB2O15479 319 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 MAGEB3O15480 346 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 TTKP33981 857 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 THAP2Q9H0W7 228 aa12.87□□□□□ -0.35
KDM3A-216ENST00000542128 TPST1O60507 370 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 SPAG6O75602 509 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 ALADP13716 330 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 THPOP40225 353 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 ACADVLP49748 655 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 DRG2P55039 364 aaKnown RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 NADK2Q4G0N4 442 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 APOBEC3HQ6NTF7 200 aaKnown RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 FRMD5Q7Z6J6 570 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 FDFT1P37268 417 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 BFSP2Q13515 415 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 ZNF572Q7Z3I7 529 aaPredicted RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 MICU2Q8IYU8 434 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 FAF2Q96CS3 445 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 CITED4Q96RK1 184 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 COPG2Q9UBF2 871 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 ACTL7BQ9Y614 415 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 ZC3H4Q9UPT8 1303 aaKnown RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 TM9SF1O15321 606 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 CLASP2O75122 1294 aaKnown RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 OR6B1O95007 311 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 IFNA8P32881 189 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 CASP2P42575 452 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 KRR1Q13601 381 aaKnown RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 GPR107Q5VW38 600 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 SPOPLQ6IQ16 392 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 BNC2Q6ZN30 1099 aaPredicted RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 PDZD4Q76G19 769 aaPredicted RBP12.86□□□□□ -0.35
KDM3A-216ENST00000542128 AMIGO2Q86SJ2 522 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 FNDC8Q8TC99 324 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
KDM3A-216ENST00000542128 MED1Q15648 1581 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 MYMKA6NI61 221 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 EPHB6O15197 1021 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 PQBP1O60828 265 aaKnown RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 ICAM1P05362 532 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 ATG14Q6ZNE5 492 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 FBXO16Q8IX29 292 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 GABPB2Q8TAK5 448 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 MID2Q9UJV3 735 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 BAG5Q9UL15 447 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 A0A0A6YYK5 440 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 SEMA3DO95025 777 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 CLK1P49759 484 aaKnown RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 KNOP1Q1ED39 458 aaKnown RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 TUBA3EQ6PEY2 450 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 RHOT1Q8IXI2 618 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 SCFD1Q8WVM8 642 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 CLPTM1LQ96KA5 538 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 S100A14Q9HCY8 104 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 PHGDHO43175 533 aaKnown RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 BAIAP3O94812 1187 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 ALOX5P09917 674 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 WEE2P0C1S8 567 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 PABPC4LP0CB38 370 aaKnown RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 NELFEP18615 380 aaKnown RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 YWHABP31946 246 aaKnown RBP12.85□□□□□ -0.35
KDM3A-216ENST00000542128 TPTEP56180 551 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 CDC42EP1Q00587 391 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 INPP5AQ14642 412 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 NAALADL2Q58DX5 795 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 OR6B2Q6IFH4 312 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 CENPPQ6IPU0 288 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 MFSD5Q6N075 450 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 IQCF2Q8IXL9 164 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 XXYLT1Q8NBI6 393 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 CNDP1Q96KN2 507 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 CALN1Q9BXU9 219 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 TLK1Q9UKI8 766 aa12.85□□□□□ -0.35
KDM3A-216ENST00000542128 SIN3BO75182 1162 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 TADA2AO75478 443 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms