RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 ARHGAP18Q8N392 663 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 WHAMMQ8TF30 809 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 SMARCE1Q969G3 411 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 HEXIM2Q96MH2 286 aaKnown RBP12.01□□□□□ -0.49
VTN-203ENST00000542029 XPO6Q96QU8 1125 aaKnown RBP12.01□□□□□ -0.49
VTN-203ENST00000542029 KLF16Q9BXK1 252 aaPredicted RBP12.01□□□□□ -0.49
VTN-203ENST00000542029 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.01□□□□□ -0.49
VTN-203ENST00000542029 ZNF510Q9Y2H8 683 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 USP3Q9Y6I4 520 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 DCDC2BA2VCK2 349 aa12□□□□□ -0.49
VTN-203ENST00000542029 PSMA7O14818 248 aa12□□□□□ -0.49
VTN-203ENST00000542029 SCAMP3O14828 347 aaKnown RBP12□□□□□ -0.49
VTN-203ENST00000542029 TULP3O75386 442 aa12□□□□□ -0.49
VTN-203ENST00000542029 KLF8O95600 359 aaPredicted RBP12□□□□□ -0.49
VTN-203ENST00000542029 RARGP13631 454 aa12□□□□□ -0.49
VTN-203ENST00000542029 HOXC13P31276 330 aa12□□□□□ -0.49
VTN-203ENST00000542029 GBP1P32455 592 aa12□□□□□ -0.49
VTN-203ENST00000542029 KIR2DL1P43626 348 aaPredicted RBP12□□□□□ -0.49
VTN-203ENST00000542029 SLC6A11P48066 632 aa12□□□□□ -0.49
VTN-203ENST00000542029 COG7P83436 770 aa12□□□□□ -0.49
VTN-203ENST00000542029 PNOCQ13519 176 aa12□□□□□ -0.49
VTN-203ENST00000542029 ANO4Q32M45 955 aa12□□□□□ -0.49
VTN-203ENST00000542029 PLA2G2CQ5R387 149 aa12□□□□□ -0.49
VTN-203ENST00000542029 C10orf120Q5SQS8 335 aa12□□□□□ -0.49
VTN-203ENST00000542029 TCERG1LQ5VWI1 586 aa12□□□□□ -0.49
VTN-203ENST00000542029 ARHGAP17Q68EM7 881 aa12□□□□□ -0.49
VTN-203ENST00000542029 ANO7Q6IWH7 933 aa12□□□□□ -0.49
VTN-203ENST00000542029 C12orf40Q86WS4 652 aa12□□□□□ -0.49
VTN-203ENST00000542029 SMYD4Q8IYR2 804 aaPredicted RBP12□□□□□ -0.49
VTN-203ENST00000542029 CCDC33Q8N5R6 958 aa12□□□□□ -0.49
VTN-203ENST00000542029 ALLCQ8N6M5 410 aa12□□□□□ -0.49
VTN-203ENST00000542029 TERB1Q8NA31 727 aa12□□□□□ -0.49
VTN-203ENST00000542029 IL17RCQ8NAC3 791 aa12□□□□□ -0.49
VTN-203ENST00000542029 TXNDC5Q8NBS9 432 aaKnown RBP12□□□□□ -0.49
VTN-203ENST00000542029 SPATA20Q8TB22 786 aa12□□□□□ -0.49
VTN-203ENST00000542029 TMEM176AQ96HP8 235 aa12□□□□□ -0.49
VTN-203ENST00000542029 SPACA7Q96KW9 195 aa12□□□□□ -0.49
VTN-203ENST00000542029 METTL14Q9HCE5 456 aaKnown RBP12□□□□□ -0.49
VTN-203ENST00000542029 CISHQ9NSE2 258 aa12□□□□□ -0.49
VTN-203ENST00000542029 POLR3BQ9NW08 1133 aaPredicted RBP12□□□□□ -0.49
VTN-203ENST00000542029 MARK1Q9P0L2 795 aa12□□□□□ -0.49
VTN-203ENST00000542029 ARMCX3Q9UH62 379 aaPredicted RBP12□□□□□ -0.49
VTN-203ENST00000542029 NAGPAQ9UK23 515 aa12□□□□□ -0.49
VTN-203ENST00000542029 COQ4Q9Y3A0 265 aa12□□□□□ -0.49
VTN-203ENST00000542029 SPTBN2O15020 2390 aa12□□□□□ -0.49
VTN-203ENST00000542029 WDR87Q6ZQQ6 2873 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 A0A1W2PQH9 124 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 CYP26A1O43174 497 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 CAVIN2O95810 425 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 TBX18O95935 607 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 IRF1P10914 325 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 TIE1P35590 1138 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 DPP6P42658 865 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 CETN1Q12798 172 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 E2F5Q15329 346 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 ZNF394Q53GI3 561 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 DCAF17Q5H9S7 520 aaPredicted RBP11.99□□□□□ -0.49
VTN-203ENST00000542029 SPDYCQ5MJ68 293 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 PPP1R26Q5T8A7 1209 aaPredicted RBP11.99□□□□□ -0.49
VTN-203ENST00000542029 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 GRAMD4Q6IC98 578 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 SDE2Q6IQ49 451 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 GPRIN1Q7Z2K8 1008 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 TMEM25Q86YD3 366 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 ZC3H3Q8IXZ2 948 aaKnown RBP11.99□□□□□ -0.49
VTN-203ENST00000542029 PHTF2Q8N3S3 785 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 ANKRD52Q8NB46 1076 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 ENGASEQ8NFI3 743 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 SEMA4DQ92854 862 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 EEF2KMTQ96G04 330 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 DHTKD1Q96HY7 919 aaPredicted RBP11.99□□□□□ -0.49
VTN-203ENST00000542029 DCLK3Q9C098 648 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 DUSP15Q9H1R2 295 aaPredicted RBP11.99□□□□□ -0.49
VTN-203ENST00000542029 KIAA1257Q9ULG3 409 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 STARD13Q9Y3M8 1113 aa11.99□□□□□ -0.49
VTN-203ENST00000542029 KIF26AQ9ULI4 1882 aaPredicted RBP11.99□□□□□ -0.49
VTN-203ENST00000542029 BCLAF3A2AJT9 711 aaKnown RBP11.98□□□□□ -0.49
VTN-203ENST00000542029 SGK1O00141 431 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 CACNG3O60359 315 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 GREM1O60565 184 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 TBXAS1P24557 533 aaPredicted RBP11.98□□□□□ -0.49
VTN-203ENST00000542029 CHKAP35790 457 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 PGFP49763 221 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 RAD23BP54727 409 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 CREB5Q02930 508 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 KDSRQ06136 332 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 C10orf76Q5T2E6 689 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 FOXR2Q6PJQ5 311 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 PIGZQ86VD9 579 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 ZNF513Q8N8E2 541 aaPredicted RBP11.98□□□□□ -0.49
VTN-203ENST00000542029 NAT16Q8N8M0 369 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 SLC4A11Q8NBS3 891 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 MDGA1Q8NFP4 955 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 OLIG1Q8TAK6 271 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 BBS2Q9BXC9 721 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 NMUR1Q9HB89 426 aa11.98□□□□□ -0.49
VTN-203ENST00000542029 DNAJC17Q9NVM6 304 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms