RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 CA9Q16790 459 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 DUSP28Q4G0W2 176 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 C4orf22Q6V702 233 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 SH2D5Q6ZV89 423 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 CCDC91Q7Z6B0 441 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 AGGF1Q8N302 714 aaeCLIP13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 KIF2BQ8N4N8 673 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 BEST2Q8NFU1 509 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 THOC1Q96FV9 657 aaKnown RBP13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 FAM49BQ9NUQ9 324 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 HEY1Q9Y5J3 304 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 FAM155BO75949 473 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 C1QAP02745 245 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 INHBAP08476 426 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 DHRS4L1P0CG22 281 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 SMPD1P17405 629 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 SCNN1AP37088 669 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 NEK3P51956 506 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 KIZQ2M2Z5 673 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 FYB2Q5VWT5 728 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 ARCQ7LC44 396 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 APOPT1Q96IL0 206 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 KLC2Q9H0B6 622 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 ETNK2Q9NVF9 386 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 TUBGCP4Q9UGJ1 667 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 TRIM33Q9UPN9 1127 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 SLC45A1Q9Y2W3 748 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 RRN3P2A6NIE6 340 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 GOLGA8RI6L899 631 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 C2CD2LO14523 706 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 HGSO14964 777 aaPredicted RBP13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 LPXNO60711 386 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 AVILO75366 819 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 TOMM70O94826 608 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 ETV4P43268 484 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 RPL34P49207 117 aaKnown RBP13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 CDC42EP1Q00587 391 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 DPYSL2Q16555 572 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 DGKDQ16760 1214 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 ALKAL1Q6UXT8 129 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 CHSY1Q86X52 802 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 CDKL3Q8IVW4 592 aaPredicted RBP13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 MCUQ8NE86 351 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 CENPIQ92674 756 aaPredicted RBP13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 SLC10A4Q96EP9 437 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 SERAC1Q96JX3 654 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 KLF6Q99612 283 aaPredicted RBP13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 LRMDAQ9H2I8 198 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 YY1AP1Q9H869 796 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 ETNK1Q9HBU6 452 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 POPDC2Q9HBU9 364 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 CNTN3Q9P232 1028 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 TTLL3Q9Y4R7 772 aa13.78□□□□□ -0.2
PRKAB1-206ENST00000541640 PDHXO00330 501 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 TRDMT1O14717 391 aaKnown RBP13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 GPR32O75388 356 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 GSTA2P09210 222 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 EZRP15311 586 aaKnown RBP13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 CYP2F1P24903 491 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 L1CAMP32004 1257 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 FAAP100Q0VG06 881 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 PCBP1Q15365 356 aaKnown RBP eCLIP13.77□□□□□ -0.215e-7■■□□□ 11.5
PRKAB1-206ENST00000541640 SOWAHAQ2M3V2 549 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 PARP6Q2NL67 630 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 SLC45A4Q5BKX6 768 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 SYCP2LQ5T4T6 812 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 C9orf57Q5W0N0 161 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 SLC26A9Q7LBE3 791 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 CAND1Q86VP6 1230 aaKnown RBP13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 SLC26A11Q86WA9 606 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 OR6B3Q8NGW1 331 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 LRRC39Q96DD0 335 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 RAB3IPQ96QF0 476 aaPredicted RBP13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 TACO1Q9BSH4 297 aaKnown RBP13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 EIF2AQ9BY44 585 aaKnown RBP13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 B3GNT5Q9BYG0 378 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 MANSC1Q9H8J5 431 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 MORF4L1Q9UBU8 362 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 GTF2IRD1Q9UHL9 959 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 ZNF180Q9UJW8 692 aa13.77□□□□□ -0.21
PRKAB1-206ENST00000541640 ECM2O94769 699 aaPredicted RBP13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 TROVE2P10155 538 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 ZFXP17010 805 aaPredicted RBP13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 PRKCHP24723 683 aa13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 BST2Q10589 180 aaKnown RBP13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 TTC39BQ5VTQ0 682 aaPredicted RBP13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 NOTUMQ6P988 496 aa13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 CATSPER4Q7RTX7 472 aa13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 CRYBG2Q8N1P7 616 aa13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 OR6J1Q8NGC5 347 aa13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 INPP5DQ92835 1189 aa13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 C18orf25Q96B23 403 aaPredicted RBP13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 SETD4Q9NVD3 440 aa13.76□□□□□ -0.21
PRKAB1-206ENST00000541640 WDR91A4D1P6 747 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms