RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 RAPGEF5Q92565 580 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 BADQ92934 168 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 FUBP3Q96I24 572 aaKnown RBP eCLIP9.07□□□□□ -0.96
THBS3-210ENST00000541576 ZNF558Q96NG5 402 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 HEMGNQ9BXL5 484 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 NGRNQ9NPE2 291 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.07□□□□□ -0.96
THBS3-210ENST00000541576 PCSK1NQ9UHG2 260 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 MTUS1Q9ULD2 1270 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 USP18Q9UMW8 372 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 GOLGA6BA6NDN3 693 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 DAB1O75553 588 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 ZBED1O96006 694 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 USP17L7P0C7H9 530 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 MATKP42679 507 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 DAOAP59103 153 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 USP41Q3LFD5 358 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 KCNT1Q5JUK3 1230 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 TAS1R1Q7RTX1 841 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 DEFB106AQ8N104 65 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 YME1L1Q96TA2 773 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 DDX23Q9BUQ8 820 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 AMACRQ9UHK6 382 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 PCDHB5Q9Y5E4 795 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 ALPK3Q96L96 1907 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 LRRD1A4D1F6 860 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 EIF4E1BA6NMX2 242 aaKnown RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 PRPSAP2O60256 369 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 NEBLO76041 1014 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 TRUB2O95900 331 aaKnown RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 FGBP02675 491 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 RALAP11233 206 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 CPB1P15086 417 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 TFE3P19532 575 aaPredicted RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 ARPP19P56211 112 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 ADCY2Q08462 1091 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 PPP2R5EQ16537 467 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 GLE1Q53GS7 698 aaKnown RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 CCNI2Q6ZMN8 369 aaPredicted RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 ZNF365Q70YC5 407 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 SCN4BQ8IWT1 228 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 TMEM169Q96HH4 297 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 PGLYRP2Q96PD5 576 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 SLITRK1Q96PX8 696 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 OXCT2Q9BYC2 517 aaPredicted RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 ADAM33Q9BZ11 813 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 OSBPL8Q9BZF1 889 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 POPDC2Q9HBU9 364 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 MRPL42Q9Y6G3 142 aaKnown RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 TBC1D4O60343 1298 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 EFEMP2O95967 443 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 LAG3P18627 525 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 HPDP32754 393 aaPredicted RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 IRAK1P51617 712 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 DCAF6Q58WW2 860 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 SCYL2Q6P3W7 929 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 VSTM1Q6UX27 236 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 MFSD7Q6UXD7 560 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 C7orf61Q8IZ16 206 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 MAIP1Q8WWC4 291 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 PEBP4Q96S96 227 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 C11orf84Q9BUA3 381 aaPredicted RBP9.06□□□□□ -0.96
THBS3-210ENST00000541576 CAPS2Q9BXY5 557 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 STIM2Q9P246 746 aa9.06□□□□□ -0.96
THBS3-210ENST00000541576 ESYT3A0FGR9 886 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 CARNS1A5YM72 827 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 YJEFN3A6XGL0 299 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 E7ENQ6 273 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 CAPN9O14815 690 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 HEXIM1O94992 359 aaKnown RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 TUBBP07437 444 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 KRT10P13645 584 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 NOS2P35228 1153 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 HDAC4P56524 1084 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 COPS2P61201 443 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 GPR17Q13304 367 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SLC25A52Q3SY17 297 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 KIAA1841Q6NSI8 718 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 TTC27Q6P3X3 843 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 PRSS55Q6UWB4 352 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 RSPO2Q6UXX9 243 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 SPOCD1Q6ZMY3 1216 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 HFE2Q6ZVN8 426 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 CYP4V2Q6ZWL3 525 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 RNF168Q8IYW5 571 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 SLC39A11Q8N1S5 342 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 ATAD1Q8NBU5 361 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 IRGQQ8WZA9 623 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 CENPIQ92674 756 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 MAGOHBQ96A72 148 aaKnown RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 SLC2A13Q96QE2 648 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 VN1R3Q9BXE9 311 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SLITRK6Q9H5Y7 841 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 STAP1Q9ULZ2 295 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 R3HDM2Q9Y2K5 976 aaKnown RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 C3orf70A6NLC5 250 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 TTI1O43156 1089 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 MAGEA11P43364 429 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SULT1E1P49888 294 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SLC5A3P53794 718 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms