RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 PTPRQQ9UMZ3 2332 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 A0A1B0GTW7 788 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 KCNJ18B7U540 433 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 NEDD8-MDP1E9PL57 170 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
COPA-205ENST00000541366 DKK1O94907 266 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 YWHAQP27348 245 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 ITPKBP27987 946 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 CD6P30203 668 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 C19orf57Q0VDD7 668 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 MYO1EQ12965 1108 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 GSE1Q14687 1217 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 MAPRE1Q15691 268 aaKnown RBP12.53□□□□□ -0.4
COPA-205ENST00000541366 HLA-BQ31612 363 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 L1TD1Q5T7N2 865 aaKnown RBP12.53□□□□□ -0.4
COPA-205ENST00000541366 SDE2Q6IQ49 451 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 TPGS1Q6ZTW0 290 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 USP49Q70CQ1 688 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 DPH6Q7L8W6 267 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
COPA-205ENST00000541366 PIP4K2CQ8TBX8 421 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 RHBDD1Q8TEB9 315 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 DNASE2BQ8WZ79 361 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 FOXJ1Q92949 421 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 HVCN1Q96D96 273 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 OTUB2Q96DC9 234 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 P2RY11Q96G91 374 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 ANKRD36BP1Q96IX9 119 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 CEP295NLQ96MC4 621 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 ACCSQ96QU6 501 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 KCNK16Q96T55 309 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 GABRG3Q99928 467 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 B3GNT5Q9BYG0 378 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 EHD2Q9NZN4 543 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.53□□□□□ -0.4
COPA-205ENST00000541366 NAV2Q8IVL1 2488 aa12.53□□□□□ -0.4
COPA-205ENST00000541366 A0A087WV48 116 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 SLC26A4O43511 780 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 GREM1O60565 184 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 GCNT3O95395 438 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 LDHAP00338 332 aaKnown RBP12.52□□□□□ -0.41
COPA-205ENST00000541366 NCAM1P13591 858 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 PTPN1P18031 435 aaKnown RBP12.52□□□□□ -0.41
COPA-205ENST00000541366 GARTP22102 1010 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 GNL1P36915 607 aaPredicted RBP12.52□□□□□ -0.41
COPA-205ENST00000541366 DCAF12L1Q5VU92 463 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 NUP93Q8N1F7 819 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 OR6B3Q8NGW1 331 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 SCFD1Q8WVM8 642 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 BHMTQ93088 406 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 DNAJC19Q96DA6 116 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 ZSCAN31Q96LW9 406 aaPredicted RBP12.52□□□□□ -0.41
COPA-205ENST00000541366 BBS2Q9BXC9 721 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 ZDHHC5Q9C0B5 715 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 MKRN2Q9H000 416 aaKnown RBP12.52□□□□□ -0.41
COPA-205ENST00000541366 SNX25Q9H3E2 840 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 WSB2Q9NYS7 404 aaPredicted RBP12.52□□□□□ -0.41
COPA-205ENST00000541366 GMIPQ9P107 970 aa12.52□□□□□ -0.41
COPA-205ENST00000541366 EIF2B4Q9UI10 523 aaKnown RBP12.52□□□□□ -0.41
COPA-205ENST00000541366 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 A0A1B0GVT2 93 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 KCNK3O14649 394 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 TBX18O95935 607 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 CST3P01034 146 aaPredicted RBP12.51□□□□□ -0.41
COPA-205ENST00000541366 TYRP14679 529 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 MATKP42679 507 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 CLDN6P56747 220 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 FUT11Q495W5 492 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 CACUL1Q86Y37 369 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 CBWD2Q8IUF1 395 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 SCUBE3Q8IX30 993 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 EPSTI1Q96J88 318 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 UBL7Q96S82 380 aaPredicted RBP12.51□□□□□ -0.41
COPA-205ENST00000541366 PLK2Q9NYY3 685 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 EXOC7Q9UPT5 735 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
COPA-205ENST00000541366 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
COPA-205ENST00000541366 BCAT2O15382 392 aaPredicted RBP12.5□□□□□ -0.41
COPA-205ENST00000541366 CACNG3O60359 315 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 PRPF6O94906 941 aaKnown RBP12.5□□□□□ -0.41
COPA-205ENST00000541366 CER1O95813 267 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 TNNC2P02585 160 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 CISD3P0C7P0 127 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 ZNF883P0CG24 379 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 ABCG1P45844 678 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 CSNK1EP49674 416 aaKnown RBP12.5□□□□□ -0.41
COPA-205ENST00000541366 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
COPA-205ENST00000541366 DHRS13Q6UX07 377 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 DBX2Q6ZNG2 339 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 PAQR9Q6ZVX9 377 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 GPD1LQ8N335 351 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 C1orf216Q8TAB5 229 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 ELMO3Q96BJ8 720 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 ELOVL4Q9GZR5 314 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 USP36Q9P275 1121 aaKnown RBP12.5□□□□□ -0.41
COPA-205ENST00000541366 RAI2Q9Y5P3 530 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms