RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ZNF358Q9NW07 568 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 DDX56Q9NY93 547 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 SYNPO2Q9UMS6 1093 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 PCDHGB4Q9UN71 923 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 PLA2G4CQ9UP65 541 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 PCDHGB5Q9Y5G0 923 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 STYXL1Q9Y6J8 313 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 I3L4J1 428 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 AHCYL1O43865 530 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 ATG7O95352 703 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 ARRB2P32121 409 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 PHKA2P46019 1235 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 SLC18A2Q05940 514 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 NBPF12Q5TAG4 269 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 CEP128Q6ZU80 1094 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 CYP4V2Q6ZWL3 525 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 MTBPQ96DY7 904 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 NLRP4Q96MN2 994 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 PCYT2Q99447 389 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 TRIM4Q9C037 500 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 POPDC2Q9HBU9 364 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 NGRNQ9NPE2 291 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 MAN1C1Q9NR34 630 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 G3BP2Q9UN86 482 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 PLLPQ9Y342 182 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 AK5Q9Y6K8 562 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 COL11A1P12107 1806 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 APOC4-APOC2K7ER74 178 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 ADCY6O43306 1168 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 OR6B1O95007 311 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 METTL18O95568 372 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 APOC2P02655 101 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 NFICP08651 508 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 LBRQ14739 615 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 Q3C1V9 767 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 SFT2D3Q587I9 215 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 PPM1JQ5JR12 505 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 UNC5AQ6ZN44 842 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 BRSK2Q8IWQ3 736 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 ELOVL4Q9GZR5 314 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 DHX33Q9H6R0 707 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 KCNG1Q9UIX4 513 aa10.76□□□□□ -0.69
CDC42SE1-207ENST00000540998 HCRTO43612 131 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 DNAJC6O75061 913 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 TRUB2O95900 331 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 LMNAP02545 664 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 HOXC6P09630 235 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 ARL2P36404 184 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 TEX44Q53QW1 395 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 PCGF5Q86SE9 256 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 SLC26A11Q86WA9 606 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 CHSY1Q86X52 802 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 ADGRF2Q8IZF7 708 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 ZNF398Q8TD17 642 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 SLC26A7Q8TE54 656 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 NSUN6Q8TEA1 469 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 GPRASP2Q96D09 838 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 VCXQ9H320 206 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 USP29Q9HBJ7 922 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 PNPOQ9NVS9 261 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 HBS1LQ9Y450 684 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 FER1L6Q2WGJ9 1857 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 MICAL2O94851 1124 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 CYP3A5P20815 502 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 PEX2P28328 305 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 GRIA2P42262 883 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 NAMPTP43490 491 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 HADHQ16836 314 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 FAM219BQ5XKK7 198 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 RXFP2Q8WXD0 754 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 PGBD4Q96DM1 585 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 GBP5Q96PP8 586 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 ADPGKQ9BRR6 497 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 B3GNT5Q9BYG0 378 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 SSU72Q9NP77 194 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 ZNF214Q9UL59 606 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 DNAJC16Q9Y2G8 782 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 PSAT1Q9Y617 370 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 A6NJR5 290 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 SPECC1L-ADORA2AF8WAN1 911 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 TXNDC9O14530 226 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 MSCO60682 206 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 KRT7P08729 469 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 GBE1Q04446 702 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 RASIP1Q5U651 963 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 MAP1SQ66K74 1059 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 OR6B2Q6IFH4 312 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 CASC4Q6P4E1 433 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 MAVSQ7Z434 540 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 GALNT15Q8N3T1 639 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 TEPSINQ96N21 525 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 ECSITQ9BQ95 431 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 CXCL16Q9H2A7 254 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 MINDY3Q9H8M7 445 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 NDE1Q9NXR1 346 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 SIX4Q9UIU6 781 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms