RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 COG7P83436 770 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 SLC6A3Q01959 620 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 SLC5A9Q2M3M2 681 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 OR6B2Q6IFH4 312 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 RSRC2Q7L4I2 434 aaKnown RBP18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 SLC26A9Q7LBE3 791 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 ZNF571Q7Z3V5 609 aaPredicted RBP18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 TMEM150AQ86TG1 271 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 SCUBE3Q8IX30 993 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 CELF5Q8N6W0 485 aaKnown RBP18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 TC2NQ8N9U0 490 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 ITFG1Q8TB96 612 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 CPA5Q8WXQ8 436 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 GMIPQ9P107 970 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 ADAMTS1Q9UHI8 967 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 LCMT1Q9UIC8 334 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 DNMT3LQ9UJW3 386 aa18.36■□□□□ 0.53
CLSTN3-210ENST00000540931 DENND4AQ7Z401 1863 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 LOC730098B7Z3J9 87 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 MOSPD3O75425 235 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 ECI2O75521 394 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 OLFM2O95897 454 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 OAS1P00973 400 aaKnown RBP18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 CALCAP01258 141 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 CKMP06732 381 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 ALADP13716 330 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 CEBPBP17676 345 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 SSTR3P32745 418 aaPredicted RBP18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 CYLC1P35663 651 aaPredicted RBP18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 CCR2P41597 374 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 SLC18A3Q16572 532 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 PTPN20Q4JDL3 420 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 BSPRYQ5W0U4 402 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 ALYREFQ86V81 257 aaKnown RBP18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 MAB21L3Q8N8X9 362 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 SLC30A5Q8TAD4 765 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 ZSCAN18Q8TBC5 510 aaPredicted RBP18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 DEPDC1BQ8WUY9 529 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 ELSPBP1Q96BH3 223 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 FAM149B1Q96BN6 582 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 TCEAL4Q96EI5 215 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 ASB16Q96NS5 453 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 MRPL47Q9HD33 250 aaKnown RBP18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 TDP1Q9NUW8 608 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 THG1LQ9NWX6 298 aaKnown RBP18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 ARHGAP26Q9UNA1 814 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 PAXBP1Q9Y5B6 917 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 SCINQ9Y6U3 715 aa18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 ZNF638Q14966 1978 aaKnown RBP18.35■□□□□ 0.53
CLSTN3-210ENST00000540931 A0A1W2PQH9 124 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 PAPSS1O43252 624 aaPredicted RBP18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 CFHP08603 1231 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 SKILP12757 684 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 RARGP13631 454 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 GBP1P32455 592 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 NNTQ13423 1086 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 ALKBH5Q6P6C2 394 aaKnown RBP18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 CCDC112Q8NEF3 446 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 MCRS1Q96EZ8 462 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 RPGRIP1Q96KN7 1286 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 NCAPGQ9BPX3 1015 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 SLC46A2Q9BY10 475 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 ISCUQ9H1K1 167 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 NHEJ1Q9H9Q4 299 aaPredicted RBP18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 TRPC7Q9HCX4 862 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 ARHGAP20Q9P2F6 1191 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 CYTH4Q9UIA0 394 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 STAP1Q9ULZ2 295 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 ZNF510Q9Y2H8 683 aa18.34■□□□□ 0.53
CLSTN3-210ENST00000540931 SLC9A3R1O14745 358 aaPredicted RBP18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 TADA3O75528 432 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 EIF4A3P38919 411 aaKnown RBP18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 CYP4F8P98187 520 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 C10orf120Q5SQS8 335 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 ACBD5Q5T8D3 534 aaPredicted RBP18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 E4F1Q66K89 784 aaPredicted RBP18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 TXNDC8Q6A555 127 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 WDR59Q6PJI9 974 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 ARID3BQ8IVW6 561 aaPredicted RBP18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 MCOLN2Q8IZK6 566 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 C3orf20Q8ND61 904 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 ING5Q8WYH8 240 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 SERPINB11Q96P15 392 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 MYADMQ96S97 322 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 PCDHB18PQ96TA0 734 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 DCLK3Q9C098 648 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 PARVAQ9NVD7 372 aa18.33■□□□□ 0.52
CLSTN3-210ENST00000540931 C19orf67A6NJJ6 358 aa18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 YJEFN3A6XGL0 299 aa18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 E7ENQ6 273 aa18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 ANHXE9PGG2 379 aa18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 DDX3XO00571 662 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 F9P00740 461 aa18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 SLC2A3P11169 496 aa18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 MBL2P11226 248 aaPredicted RBP18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 NCAM1P13591 858 aa18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 FECHP22830 423 aa18.32■□□□□ 0.52
CLSTN3-210ENST00000540931 NOS2P35228 1153 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms