RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 GOLGA8FQ08AF8 430 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 GOLGA8DPQ0D2H9 430 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 SYCP1Q15431 976 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 EML3Q32P44 896 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 ZSCAN23Q3MJ62 389 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 PM20D1Q6GTS8 502 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 KLHDC10Q6PID8 442 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 TXNDC11Q6PKC3 985 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 RSRC2Q7L4I2 434 aaKnown RBP9.69□□□□□ -0.86
SNHG1-215ENST00000540904 BHLHA9Q7RTU4 235 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 SLC47A2Q86VL8 602 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 RALGPS2Q86X27 583 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-215ENST00000540904 MIB1Q86YT6 1006 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 PASD1Q8IV76 773 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 FAM71AQ8IYT1 594 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 CPA6Q8N4T0 437 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 MSANTD3Q96H12 275 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 NELL2Q99435 816 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 ECT2Q9H8V3 914 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 PLCB1Q9NQ66 1216 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 CNGB3Q9NQW8 809 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 ST7Q9NRC1 585 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 CLIC5Q9NZA1 410 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 DNMT3LQ9UJW3 386 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 SH3BP1Q9Y3L3 701 aa9.69□□□□□ -0.86
SNHG1-215ENST00000540904 GREB1Q4ZG55 1949 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 E2F8A0AVK6 867 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 YJEFN3A6XGL0 299 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 E7ENQ6 273 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 F8VZ95 297 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 EPHB6O15197 1021 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 NCAM2O15394 837 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 NFATC1O95644 943 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 CLCN1P35523 988 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 KRT9P35527 623 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 GPD2P43304 727 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 DAOAP59103 153 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 BPIFB4P59827 614 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 POLR2FP61218 127 aaKnown RBP9.68□□□□□ -0.86
SNHG1-215ENST00000540904 EFEMP1Q12805 493 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 NR1H3Q13133 447 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 PON2Q15165 354 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 BSPRYQ5W0U4 402 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 BTBD8Q5XKL5 378 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 C1orf228Q6PIY5 440 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 APTXQ7Z2E3 356 aaKnown RBP9.68□□□□□ -0.86
SNHG1-215ENST00000540904 SCUBE3Q8IX30 993 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 ADGRG2Q8IZP9 1017 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 DTWD2Q8NBA8 298 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 RNF139Q8WU17 664 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 EDEM1Q92611 657 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 WBP2Q969T9 261 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 HSFY1Q96LI6 401 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 CDK5RAP1Q96SZ6 601 aaKnown RBP9.68□□□□□ -0.86
SNHG1-215ENST00000540904 NAA15Q9BXJ9 866 aaKnown RBP9.68□□□□□ -0.86
SNHG1-215ENST00000540904 KLF16Q9BXK1 252 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-215ENST00000540904 STK33Q9BYT3 514 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 OSBPL6Q9BZF3 934 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 MIS12Q9H081 205 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 GANQ9H2C0 597 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 CBX8Q9HC52 389 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 NLRC4Q9NPP4 1024 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 DLGAP2Q9P1A6 1054 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 TBC1D14Q9P2M4 693 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 RASAL2Q9UJF2 1139 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 SIK3Q9Y2K2 1263 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 OBSL1O75147 1896 aa9.68□□□□□ -0.86
SNHG1-215ENST00000540904 NUP210Q8TEM1 1887 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-215ENST00000540904 FBXO21O94952 628 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 CYP17A1P05093 508 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 HMBSP08397 361 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 GJA4P35212 333 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 ACADSBP45954 432 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 NUBP1P53384 320 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 AMPD2Q01433 879 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 FZD5Q13467 585 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 IQCB1Q15051 598 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 DHCR24Q15392 516 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 MEA1Q16626 185 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 NAIF1Q69YI7 327 aaPredicted RBP9.67□□□□□ -0.86
SNHG1-215ENST00000540904 SMYD5Q6GMV2 418 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 HTR3DQ70Z44 454 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 LUZP1Q86V48 1076 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 BBS7Q8IWZ6 715 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 SCML4Q8N228 414 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 ZNF276Q8N554 614 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 KIAA1958Q8N8K9 716 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 PRSS33Q8NF86 280 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 NEK11Q8NG66 645 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 CLEC4CQ8WTT0 213 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 STK32AQ8WU08 396 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 IRGQQ8WZA9 623 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 GOLGA1Q92805 767 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 CLDN23Q96B33 292 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 CHFRQ96EP1 664 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 SPAG5Q96R06 1193 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 ERGIC2Q96RQ1 377 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 PRRX2Q99811 253 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms