RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 MYO1FO00160 1098 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 TULP2O00295 520 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 XPO1O14980 1071 aaKnown RBP6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PALMO75781 387 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CXCL14O95715 111 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 ERBB2P04626 1255 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 LINC00271P0C7V0 271 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 KRT3P12035 628 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 RPL17P18621 184 aaKnown RBP6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CYP2F1P24903 491 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 MSX1P28360 303 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 ELF1P32519 619 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 RNASE9P60153 205 aaKnown RBP6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 ERVK-21P61565 698 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CREMQ03060 361 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 SMARCB1Q12824 385 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 GPR17Q13304 367 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 MAMLD1Q13495 774 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 ZNF268Q14587 947 aaPredicted RBP6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 MESDQ14696 234 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 MAP7D1Q3KQU3 841 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PLA2G4EQ3MJ16 856 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PTPN20Q4JDL3 420 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 C4orf17Q53FE4 359 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 FAM102AQ5T9C2 384 aaPredicted RBP6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 LLGL2Q6P1M3 1020 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 VSTM1Q6UX27 236 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CLEC20AQ6ZU45 233 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PAQR9Q6ZVX9 377 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 TMC7Q7Z402 723 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PEX26Q7Z412 305 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 DAAM2Q86T65 1068 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PIGZQ86VD9 579 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 SLC35F6Q8N357 371 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PHTF2Q8N3S3 785 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 GALNT6Q8NCL4 622 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 TPCN2Q8NHX9 752 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 KIF18AQ8NI77 898 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 FEZF2Q8TBJ5 459 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 ZNF564Q8TBZ8 553 aaPredicted RBP6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 SLC35F5Q8WV83 523 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 AUTS2Q8WXX7 1259 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 ARNTL2Q8WYA1 636 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PIK3R5Q8WYR1 880 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 GOLGA1Q92805 767 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CALR3Q96L12 384 aaKnown RBP6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 HSFY1Q96LI6 401 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 SAMD11Q96NU1 681 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CPXM1Q96SM3 734 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 KCNK16Q96T55 309 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 SMOQ99835 787 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 SELENOOQ9BVL4 669 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 HERC2P3Q9BVR0 1158 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 PLVAPQ9BX97 442 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 VN1R3Q9BXE9 311 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 RHOBTB2Q9BYZ6 727 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 ZNF576Q9H609 170 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 OSGEPQ9NPF4 335 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 DMAP1Q9NPF5 467 aaPredicted RBP6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CHST7Q9NS84 486 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 TMLHEQ9NVH6 421 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CYTH4Q9UIA0 394 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 ANAPC7Q9UJX3 599 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 BACE2Q9Y5Z0 518 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 NCANO14594 1321 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 TDRD15B5MCY1 1934 aaKnown RBP6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 CHD9Q3L8U1 2897 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 SIGLEC16A6NMB1 481 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 E5RJQ4 531 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 SPOPO43791 374 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 BEST1O76090 585 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 CSPG5O95196 566 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 RB1P06400 928 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 DESP17661 470 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 SSR1P43307 286 aaKnown RBP6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 PLA2G4AP47712 749 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 GABRB2P47870 512 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 TKTL1P51854 596 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 SLC6A3Q01959 620 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 ROR1Q01973 937 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 DSG1Q02413 1049 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 ADIGQ0VDE8 80 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 IFRD2Q12894 506 aaPredicted RBP6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 PTP4A2Q12974 167 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 DUSP4Q13115 394 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 MYO9BQ13459 2157 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 GPM6BQ13491 265 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 TCEAL1Q15170 157 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 TAF12Q16514 161 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 MGAT5BQ3V5L5 792 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 PLEKHA7Q6IQ23 1121 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 FAM183BPQ6ZVS7 135 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 TMEM110Q86TL2 294 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 XYLT1Q86Y38 959 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 ZDHHC17Q8IUH5 632 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 ATAD1Q8NBU5 361 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 C3orf20Q8ND61 904 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 SPPL2BQ8TCT7 592 aa6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 C2orf15Q8WU43 125 aaKnown RBP6.97□□□□□ -1.29
CLTCL1-206ENST00000540896 EDARADDQ8WWZ3 215 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms