RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 FAM193AP78312 1265 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 TIAL1Q01085 375 aaKnown RBP eCLIP4.37□□□□□ -1.71
MDM2-227ENST00000540709 LARS2Q15031 903 aaKnown RBP4.37□□□□□ -1.71
MDM2-227ENST00000540709 C4orf46Q504U0 113 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 RRAGBQ5VZM2 374 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 PLAG1Q6DJT9 500 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 VSTM1Q6UX27 236 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 RNF44Q7L0R7 432 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
MDM2-227ENST00000540709 FAM71DQ8N9W8 422 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 MAP4K1Q92918 833 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 STEAP1Q9UHE8 339 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 RIMKLBQ9ULI2 386 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 HPSEQ9Y251 543 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 SLC27A6Q9Y2P4 619 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 M0R3H8 397 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 ZBED1O96006 694 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 MCM5P33992 734 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 NR4A2P43354 598 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 EIF4A1P60842 406 aaKnown RBP4.36□□□□□ -1.71
MDM2-227ENST00000540709 RBMS2Q15434 407 aaKnown RBP4.36□□□□□ -1.71
MDM2-227ENST00000540709 PFKFB3Q16875 520 aaPredicted RBP4.36□□□□□ -1.71
MDM2-227ENST00000540709 USP49Q70CQ1 688 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 C12orf76Q8N812 135 aaPredicted RBP4.36□□□□□ -1.71
MDM2-227ENST00000540709 SNX22Q96L94 193 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 DHX36Q9H2U1 1008 aaKnown RBP4.36□□□□□ -1.71
MDM2-227ENST00000540709 FAM83DQ9H4H8 585 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 AS3MTQ9HBK9 375 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 TMEM184CQ9NVA4 438 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 DNAJB11Q9UBS4 358 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 VPS4AQ9UN37 437 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 CORO2BQ9UQ03 480 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 AFG3L2Q9Y4W6 797 aa4.36□□□□□ -1.71
MDM2-227ENST00000540709 F8W8V4 182 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 SOCS2O14508 198 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 FGBP02675 491 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 MT-ND5P03915 603 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 TMEM225BP0DP42 221 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 POLGP54098 1239 aaPredicted RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 YPEL5P62699 121 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 TXNL4AP83876 142 aaKnown RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 CFHR3Q02985 330 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 SLC14A1Q13336 389 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 FHL1Q13642 323 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 KPNB1Q14974 876 aaKnown RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 SEC23BQ15437 767 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 TMTC4Q5T4D3 741 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 MEX3CQ5U5Q3 659 aaKnown RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 CHST15Q7LFX5 561 aaPredicted RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 MRPL10Q7Z7H8 261 aaKnown RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 SDR16C5Q8N3Y7 309 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 NRACQ8N912 160 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 TTC8Q8TAM2 541 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 PNISRQ8TF01 805 aaKnown RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 ZNF668Q96K58 619 aaPredicted RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 ADGRE3Q9BY15 652 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 FOXP1Q9H334 677 aaPredicted RBP4.35□□□□□ -1.71
MDM2-227ENST00000540709 ARL8BQ9NVJ2 186 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 OBP2AQ9NY56 170 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 MTMR4Q9NYA4 1195 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 DKK4Q9UBT3 224 aa4.35□□□□□ -1.71
MDM2-227ENST00000540709 IKBKBO14920 756 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 PQBP1O60828 265 aaKnown RBP4.34□□□□□ -1.71
MDM2-227ENST00000540709 RHCEP18577 417 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 ADRA1DP25100 572 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 RHDQ02161 417 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 ST3GAL2Q16842 350 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 MANEALQ5VSG8 457 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 AWAT2Q6E213 333 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 MZT2AQ6P582 158 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 BHLHA9Q7RTU4 235 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 TECPR1Q7Z6L1 1165 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 LIX1LQ8IVB5 337 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 ANKRD13AQ8IZ07 590 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 C16orf52Q8NHV5 167 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 TIFAQ96CG3 184 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 LRRC46Q96FV0 321 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 PRR11Q96HE9 360 aaPredicted RBP4.34□□□□□ -1.71
MDM2-227ENST00000540709 SIGLEC11Q96RL6 698 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 SCNM1Q9BWG6 230 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 TRIM36Q9NQ86 728 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 MAFFQ9ULX9 164 aa4.34□□□□□ -1.71
MDM2-227ENST00000540709 MYMKA6NI61 221 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 RHPN2P1A8MT19 583 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 A8MVJ9 347 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 PRAMEF2O60811 474 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 ITGB6P18564 788 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 SCP2P22307 547 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 RBL1P28749 1068 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 TACR3P29371 465 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 CPA2P48052 419 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 GPC5P78333 572 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 ID2Q02363 134 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 CCDC15Q0P6D6 951 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 TMEM63BQ5T3F8 832 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 ANO7Q6IWH7 933 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 IRF2BP2Q7Z5L9 587 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 CCDC33Q8N5R6 958 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 LINC01465Q8N7H1 131 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 PNPLA1Q8N8W4 532 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms