RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 LHX6Q9UPM6 363 aa21.14■□□□□ 0.97
LPCAT3-210ENST00000540090 LAMA5O15230 3695 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 TAF4O00268 1085 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 GREM1O60565 184 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 NDUFV2P19404 249 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 AMPD3Q01432 767 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 SLC14A1Q13336 389 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 FAM26FQ5R3K3 315 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 SDE2Q6IQ49 451 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 CNNM4Q6P4Q7 775 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 RAB44Q7Z6P3 723 aaPredicted RBP21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 CHPFQ8IZ52 775 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 TRIML1Q8N9V2 468 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 OR2I1PQ8NGU4 316 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 SMARCD1Q96GM5 515 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 TNIP3Q96KP6 325 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 ACOX2Q99424 681 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 GABRG3Q99928 467 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 MED10Q9BTT4 135 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 CUEDC2Q9H467 287 aa21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 UPF2Q9HAU5 1272 aaKnown RBP21.13■□□□□ 0.97
LPCAT3-210ENST00000540090 DSPP15924 2871 aaKnown RBP21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 GJB3O75712 270 aa21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 PGFP49763 221 aa21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 FUKQ8N0W3 1084 aa21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 SCFD1Q8WVM8 642 aa21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 HSPA12BQ96MM6 686 aa21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 XPO6Q96QU8 1125 aaKnown RBP21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 NACA2Q9H009 215 aa21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 FAM124BQ9H5Z6 455 aaPredicted RBP21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 SMYD3Q9H7B4 428 aa21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 DNAJC17Q9NVM6 304 aaKnown RBP21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 CYP8B1Q9UNU6 501 aa21.12■□□□□ 0.97
LPCAT3-210ENST00000540090 UBE4BO95155 1302 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 FASNP49327 2511 aaKnown RBP21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 PRRT4C9JH25 899 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 CACNG3O60359 315 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 TLR5O60602 858 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 PHACTR2O75167 634 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 AP1G2O75843 785 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 IRF1P10914 325 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 NASPP49321 788 aaPredicted RBP21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 ASIC1P78348 528 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 ACAP1Q15027 740 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 NELFCDQ8IXH7 590 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 C12orf56Q8IXR9 622 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 ZMIZ2Q8NF64 920 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 SMOQ99835 787 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 KLF16Q9BXK1 252 aaPredicted RBP21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 MARK1Q9P0L2 795 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 WDR35Q9P2L0 1181 aa21.11■□□□□ 0.97
LPCAT3-210ENST00000540090 SH3BP5O60239 455 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 TBX18O95935 607 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 TYRP14679 529 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 EHHADHQ08426 723 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 TRIP6Q15654 476 aaKnown RBP21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 PROSER1Q86XN7 944 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 MRGPRX1Q96LB2 322 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 CAMK1GQ96NX5 476 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 C7orf25Q9BPX7 421 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 BBS2Q9BXC9 721 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 SDCBP2Q9H190 292 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 FBXO44Q9H4M3 255 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 CSNK1G1Q9HCP0 422 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 KRT82Q9NSB4 513 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 CGNQ9P2M7 1197 aaKnown RBP21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 PCDH15Q96QU1 1955 aa21.1■□□□□ 0.97
LPCAT3-210ENST00000540090 NEDD8-MDP1E9PL57 170 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 GFRA2O00451 464 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 BEST1O76090 585 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 CISD3P0C7P0 127 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 CASP4P49662 377 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 CLDN10P78369 228 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 ZNF699Q32M78 642 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 PLEKHG6Q3KR16 790 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 ZNF667Q5HYK9 610 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 SYCP2LQ5T4T6 812 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 TOGARAM2Q6ZUX3 1019 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 ACOT1Q86TX2 421 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 RGL4Q8IZJ4 473 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 LINC00301Q8NCQ3 95 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 PLEKHO2Q8TD55 490 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 CYLDQ9NQC7 956 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 TLR8Q9NR97 1041 aaKnown RBP21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 SUSD2Q9UGT4 822 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 MTMR6Q9Y217 621 aa21.09■□□□□ 0.97
LPCAT3-210ENST00000540090 NDUFS2O75306 463 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 C4BPAP04003 597 aaKnown RBP21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 ATP5C1P36542 298 aaKnown RBP21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 AP3M2P53677 418 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 BIRC3Q13489 604 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 NCOA4Q13772 614 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 BMT2Q1RMZ1 405 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 TPGS1Q6ZTW0 290 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 UNC13DQ70J99 1090 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 CRYBG2Q8N1P7 616 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 IQUBQ8NA54 791 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 ADAMTS14Q8WXS8 1223 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 FOXJ1Q92949 421 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 DHX58Q96C10 678 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms