RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 FAM208AQ9UK61 1670 aaKnown RBP6.6□□□□□ -1.35
MRE11-209ENST00000540013 OVOS2A0A0G2JMS6 1433 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 CCDC7Q96M83 1385 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 MYOM1P52179 1685 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 RREB1Q92766 1687 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 K7ESM1 405 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 MTSS1O43312 755 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 CDC14BO60729 498 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 A1BGP04217 495 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 CELA3BP08861 270 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 KITP10721 976 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 PORP16435 677 aaPredicted RBP6.59□□□□□ -1.35
MRE11-209ENST00000540013 STMN1P16949 149 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 CST5P28325 142 aaPredicted RBP6.59□□□□□ -1.35
MRE11-209ENST00000540013 ADCY7P51828 1080 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 SUMO3P55854 103 aaPredicted RBP6.59□□□□□ -1.35
MRE11-209ENST00000540013 LGALS4P56470 323 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 PLP2Q04941 152 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 CHRNDQ07001 517 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 IL10RAQ13651 578 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 UBE3CQ15386 1083 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 SMAD1Q15797 465 aaKnown RBP6.59□□□□□ -1.35
MRE11-209ENST00000540013 KRT40Q6A162 431 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 FBXO38Q6PIJ6 1188 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 CATSPERGQ6ZRH7 1159 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 MIGA2Q7L4E1 593 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 ANKRD13BQ86YJ7 626 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 TOR1AIP2Q8NFQ8 470 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 STYXQ8WUJ0 223 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 COG3Q96JB2 828 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 LRRC37BQ96QE4 947 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 PPP1R9BQ96SB3 815 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 YME1L1Q96TA2 773 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 DESI2Q9BSY9 194 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 EDEM3Q9BZQ6 932 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 MEGF9Q9H1U4 602 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 PPP4R1LQ9P1A2 415 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 CPNE7Q9UBL6 633 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 AFF4Q9UHB7 1163 aaKnown RBP6.59□□□□□ -1.35
MRE11-209ENST00000540013 KNSTRNQ9Y448 316 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 RBM8AQ9Y5S9 174 aaKnown RBP6.59□□□□□ -1.35
MRE11-209ENST00000540013 RGPD3A6NKT7 1758 aaPredicted RBP6.59□□□□□ -1.35
MRE11-209ENST00000540013 RGPD2P0DJD1 1756 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 RGPD4Q7Z3J3 1758 aa6.59□□□□□ -1.35
MRE11-209ENST00000540013 NUP188Q5SRE5 1749 aa6.59□□□□□ -1.36
MRE11-209ENST00000540013 PARD3Q8TEW0 1356 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 A0A0A6YYK5 440 aaPredicted RBP6.58□□□□□ -1.36
MRE11-209ENST00000540013 INO80B-WBP1J3KQ70 363 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 PODXLO00592 558 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 TBCAO75347 108 aaKnown RBP6.58□□□□□ -1.36
MRE11-209ENST00000540013 TPM2P07951 284 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 VSIG10L2P0DP72 767 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 NPR1P16066 1061 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 EN2P19622 333 aaPredicted RBP6.58□□□□□ -1.36
MRE11-209ENST00000540013 ABCD1P33897 745 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 KIR2DL3P43628 341 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 POLE2P56282 527 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 BPIFB4P59827 614 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 ACVR2BQ13705 512 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 EIF4A2Q14240 407 aaKnown RBP6.58□□□□□ -1.36
MRE11-209ENST00000540013 WTAPQ15007 396 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 RAB30Q15771 203 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 EZH2Q15910 746 aaKnown RBP6.58□□□□□ -1.36
MRE11-209ENST00000540013 TBR1Q16650 682 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 TATDN1Q6P1N9 297 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 TMTC3Q6ZXV5 915 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 PRPF39Q86UA1 669 aaKnown RBP6.58□□□□□ -1.36
MRE11-209ENST00000540013 TTC9BQ8N6N2 239 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 CEP70Q8NHQ1 597 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 CENPTQ96BT3 561 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 SAMD11Q96NU1 681 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 EYA3Q99504 573 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 GDF15Q99988 308 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 GPATCH1Q9BRR8 931 aaKnown RBP6.58□□□□□ -1.36
MRE11-209ENST00000540013 SOX7Q9BT81 388 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 C2orf40Q9H1Z8 148 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 PRDM13Q9H4Q3 707 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 PRDM12Q9H4Q4 367 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 CYP4F11Q9HBI6 524 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 NECTIN3Q9NQS3 549 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 LMBRD1Q9NUN5 540 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.58□□□□□ -1.36
MRE11-209ENST00000540013 COL20A1Q9P218 1284 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 IGSF9Q9P2J2 1179 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 ADD3Q9UEY8 706 aaKnown RBP6.58□□□□□ -1.36
MRE11-209ENST00000540013 TNS2Q63HR2 1409 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 LRP5O75197 1615 aa6.58□□□□□ -1.36
MRE11-209ENST00000540013 MAP2P11137 1827 aaKnown RBP6.57□□□□□ -1.36
MRE11-209ENST00000540013 FAM234BA2RU67 622 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 C2orf78A6NCI8 922 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 CLCA1A8K7I4 914 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 H3BUI4 141 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 RTCAO00442 366 aaKnown RBP6.57□□□□□ -1.36
MRE11-209ENST00000540013 THAP12O43422 761 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 FOXD2O60548 495 aaPredicted RBP6.57□□□□□ -1.36
MRE11-209ENST00000540013 TNFRSF6BO95407 300 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 CLTBP09497 229 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 GAAP10253 952 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 ACADMP11310 421 aa6.57□□□□□ -1.36
MRE11-209ENST00000540013 ATP5DP30049 168 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms