RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 SULT1E1P49888 294 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 LONRF2Q1L5Z9 754 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 TFDP3Q5H9I0 405 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 ERMARDQ5T6L9 678 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 BSPRYQ5W0U4 402 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 SYDE1Q6ZW31 735 aaPredicted RBP12.3□□□□□ -0.44
VTN-202ENST00000539746 LRRTM3Q86VH5 581 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 RASGEF1CQ8N431 466 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.3□□□□□ -0.44
VTN-202ENST00000539746 CENPIQ92674 756 aaPredicted RBP12.3□□□□□ -0.44
VTN-202ENST00000539746 MYRFLQ96LU7 910 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 EPAS1Q99814 870 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 FAM129AQ9BZQ8 928 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 SMOC2Q9H3U7 446 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 SLITRK6Q9H5Y7 841 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 IL37Q9NZH6 218 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 CXXC1Q9P0U4 656 aaPredicted RBP12.3□□□□□ -0.44
VTN-202ENST00000539746 CYTH4Q9UIA0 394 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 SALL4Q9UJQ4 1053 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 CENPFP49454 3210 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 H3BRJ5 948 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 KRIT1O00522 736 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 ZNF197O14709 1029 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 TNFRSF10BO14763 440 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 NCAM2O15394 837 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 ENDOD1O94919 500 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 GAS8O95995 478 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 KRT1P04264 644 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 USP17L7P0C7H9 530 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 CHRNA3P32297 505 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 SSTR3P32745 418 aaPredicted RBP12.29□□□□□ -0.44
VTN-202ENST00000539746 SERPINB6P35237 376 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 RPL7AP62424 266 aaKnown RBP12.29□□□□□ -0.44
VTN-202ENST00000539746 COG7P83436 770 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
VTN-202ENST00000539746 AMPD2Q01433 879 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 RING1Q06587 406 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 DUSP4Q13115 394 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 PPP2R5DQ14738 602 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 ARHGAP15Q53QZ3 475 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
VTN-202ENST00000539746 SNX30Q5VWJ9 437 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 PPP2R2DQ66LE6 453 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 SCARA3Q6AZY7 606 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 PRSS55Q6UWB4 352 aaPredicted RBP12.29□□□□□ -0.44
VTN-202ENST00000539746 LRRC31Q6UY01 552 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 C4orf22Q6V702 233 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 RNF19BQ6ZMZ0 732 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 CEP128Q6ZU80 1094 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 ATP6V0D2Q8N8Y2 350 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 CD101Q93033 1021 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 NT5C3BQ969T7 300 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 KCNK16Q96T55 309 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 ZNF670Q9BS34 389 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 WDCPQ9H6R7 721 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 DDIT4Q9NX09 232 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 TLR6Q9Y2C9 796 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 ZNF510Q9Y2H8 683 aa12.29□□□□□ -0.44
VTN-202ENST00000539746 HBS1LQ9Y450 684 aaKnown RBP12.29□□□□□ -0.44
VTN-202ENST00000539746 TSC2P49815 1807 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 DNAH12Q6ZR08 3092 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 WDR27A2RRH5 827 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 TYW5A2RUC4 315 aaKnown RBP12.28□□□□□ -0.44
VTN-202ENST00000539746 LRRD1A4D1F6 860 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 M0QYT0 321 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 TEX28O15482 410 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 LRCH4O75427 683 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 LATS1O95835 1130 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 CALCAP01258 141 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 ACTN2P35609 894 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 ATP5C1P36542 298 aaKnown RBP12.28□□□□□ -0.44
VTN-202ENST00000539746 PBX3P40426 434 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 HCAR3P49019 387 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 NR2C2P49116 596 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 FNTAP49354 379 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 EPHB4P54760 987 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 SCAPQ12770 1279 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 GPM6BQ13491 265 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 DHX34Q14147 1143 aaKnown RBP12.28□□□□□ -0.44
VTN-202ENST00000539746 MAP9Q49MG5 647 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 PPM1LQ5SGD2 360 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 HECTD3Q5T447 861 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 MSANTD2Q6P1R3 559 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 SCYL2Q6P3W7 929 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 DEFB106AQ8N104 65 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 KIAA1958Q8N8K9 716 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 ZNF557Q8N988 423 aaPredicted RBP12.28□□□□□ -0.44
VTN-202ENST00000539746 ATAD1Q8NBU5 361 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 SLC7A14Q8TBB6 771 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 POF1BQ8WVV4 589 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 MRPS31Q92665 395 aaKnown RBP12.28□□□□□ -0.44
VTN-202ENST00000539746 PSMG2Q969U7 264 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 HAPLN3Q96S86 360 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms