RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TADA2BQ86TJ2 420 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 CDK5RAP1Q96SZ6 601 aaKnown RBP16.16■□□□□ 0.18
DDB1-216ENST00000539739 POPDC2Q9HBU9 364 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 MRPL47Q9HD33 250 aaKnown RBP16.16■□□□□ 0.18
DDB1-216ENST00000539739 ABCC13Q9NSE7 274 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 PARVAQ9NVD7 372 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 CLIC5Q9NZA1 410 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 ZKSCAN5Q9Y2L8 839 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 PCDHA13Q9Y5I0 950 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 SCINQ9Y6U3 715 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 GREB1Q4ZG55 1949 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 BRWD1Q9NSI6 2320 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 CLUHO75153 1309 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 CAPN9O14815 690 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 TMEM253P0C7T8 217 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 KRT3P12035 628 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 FSHRP23945 695 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 DDX6P26196 483 aaKnown RBP eCLIP16.16■□□□□ 0.18
DDB1-216ENST00000539739 PRSS36Q5K4E3 855 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 HECTD3Q5T447 861 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 BHLHA9Q7RTU4 235 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 SCD5Q86SK9 330 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 TMEM150AQ86TG1 271 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 SHKBP1Q8TBC3 707 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 FEZF2Q8TBJ5 459 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 RNF139Q8WU17 664 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 TCEAL4Q96EI5 215 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 THAP2Q9H0W7 228 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 CALCOCO1Q9P1Z2 691 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 MYO1AQ9UBC5 1043 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 ZMYM5Q9UJ78 669 aa16.16■□□□□ 0.18
DDB1-216ENST00000539739 ZNF638Q14966 1978 aaKnown RBP16.15■□□□□ 0.18
DDB1-216ENST00000539739 SIGLEC16A6NMB1 481 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 TADA3O75528 432 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 GRAP2O75791 330 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 RARGP13631 454 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 CCR2P41597 374 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 TUBP50607 506 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 RNASE9P60153 205 aaKnown RBP16.15■□□□□ 0.18
DDB1-216ENST00000539739 SMAD4Q13485 552 aaKnown RBP16.15■□□□□ 0.18
DDB1-216ENST00000539739 SLC5A9Q2M3M2 681 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 PLEKHA7Q6IQ23 1121 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 DCUN1D2Q6PH85 259 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 HFE2Q6ZVN8 426 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 RSRC2Q7L4I2 434 aaKnown RBP16.15■□□□□ 0.18
DDB1-216ENST00000539739 BEND5Q7L4P6 421 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 ACRBPQ8NEB7 543 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 PIWIL1Q96J94 861 aaKnown RBP16.15■□□□□ 0.18
DDB1-216ENST00000539739 PACSIN1Q9BY11 444 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 SLITRK6Q9H5Y7 841 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 NMUR1Q9HB89 426 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 TRPC7Q9HCX4 862 aa16.15■□□□□ 0.18
DDB1-216ENST00000539739 METTL5Q9NRN9 209 aaKnown RBP16.15■□□□□ 0.18
DDB1-216ENST00000539739 USP15Q9Y4E8 981 aaPredicted RBP16.15■□□□□ 0.18
DDB1-216ENST00000539739 SOBPA7XYQ1 873 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 ATMINO43313 823 aaPredicted RBP16.14■□□□□ 0.17
DDB1-216ENST00000539739 CYP1A2P05177 515 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 NCAM1P13591 858 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 GJA1P17302 382 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 PFKLP17858 780 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 CYP4F8P98187 520 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 CBX2Q14781 532 aaPredicted RBP16.14■□□□□ 0.17
DDB1-216ENST00000539739 TAF5Q15542 800 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 TEAD2Q15562 447 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 GPR158Q5T848 1215 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 TXNDC8Q6A555 127 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 ARCQ7LC44 396 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 KIAA1328Q86T90 577 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 ZNF276Q8N554 614 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 EDEM1Q92611 657 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 NACA2Q9H009 215 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 TASP1Q9H6P5 420 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 OLA1Q9NTK5 396 aaKnown RBP16.14■□□□□ 0.17
DDB1-216ENST00000539739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.14■□□□□ 0.17
DDB1-216ENST00000539739 CDH22Q9UJ99 828 aa16.14■□□□□ 0.17
DDB1-216ENST00000539739 TLR5O60602 858 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 MOSPD3O75425 235 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 DAB1O75553 588 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 ATP5C1P36542 298 aaKnown RBP16.13■□□□□ 0.17
DDB1-216ENST00000539739 PGFP49763 221 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 MAMLD1Q13495 774 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 LEXMQ3ZCV2 418 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 GET4Q7L5D6 327 aaPredicted RBP16.13■□□□□ 0.17
DDB1-216ENST00000539739 MAB21L3Q8N8X9 362 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 ITFG1Q8TB96 612 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 SUSD6Q92537 303 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 SLC2A13Q96QE2 648 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 DESI2Q9BSY9 194 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 KCNF1Q9H3M0 494 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 OSER1Q9NX31 292 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.13■□□□□ 0.17
DDB1-216ENST00000539739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.13■□□□□ 0.17
DDB1-216ENST00000539739 CTTNBP2NLQ9P2B4 639 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 TMEM59LQ9UK28 342 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 FAM50BQ9Y247 325 aa16.13■□□□□ 0.17
DDB1-216ENST00000539739 DOCK6Q96HP0 2047 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 TRAV19A0A0A6YYK7 116 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 TCRBV5S1A1TA0A578 114 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 MBTPS2O43462 519 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 DESP17661 470 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms