RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ST7Q9NRC1 585 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 CALCOCO1Q9P1Z2 691 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 UXTQ9UBK9 157 aaPredicted RBP13.64□□□□□ -0.23
CCDC42-202ENST00000539522 MYO10Q9HD67 2058 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 WEE1P30291 646 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 EIF4A3P38919 411 aaKnown RBP13.63□□□□□ -0.23
CCDC42-202ENST00000539522 VIPR2P41587 438 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC42-202ENST00000539522 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
CCDC42-202ENST00000539522 EIF4EBP2Q13542 120 aaPredicted RBP13.63□□□□□ -0.23
CCDC42-202ENST00000539522 TAF12Q16514 161 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 SYPL2Q5VXT5 272 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 BSPRYQ5W0U4 402 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 TANGO2Q6ICL3 276 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 ACAD10Q6JQN1 1059 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 ZDHHC14Q8IZN3 488 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 CMTM8Q8IZV2 173 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 ZSCAN18Q8TBC5 510 aaPredicted RBP13.63□□□□□ -0.23
CCDC42-202ENST00000539522 EDEM1Q92611 657 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 SLITRK1Q96PX8 696 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC42-202ENST00000539522 GDE1Q9NZC3 331 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 TRPM5Q9NZQ8 1165 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 ADAMTS1Q9UHI8 967 aa13.63□□□□□ -0.23
CCDC42-202ENST00000539522 FGF19O95750 216 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 ASGR2P07307 311 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 CCDC172P0C7W6 258 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 RARGP13631 454 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 TFE3P19532 575 aaPredicted RBP13.62□□□□□ -0.23
CCDC42-202ENST00000539522 TNFAIP3P21580 790 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 GBP2P32456 591 aaPredicted RBP13.62□□□□□ -0.23
CCDC42-202ENST00000539522 ACADSBP45954 432 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 TUBP50607 506 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 GSCP56915 257 aaPredicted RBP13.62□□□□□ -0.23
CCDC42-202ENST00000539522 SLC8A3P57103 927 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 AAK1Q2M2I8 961 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 RAB6CQ53S08 254 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 PPP1R15BQ5SWA1 713 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 VITQ6UXI7 678 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 TRIM72Q6ZMU5 477 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 ARID3BQ8IVW6 561 aaPredicted RBP13.62□□□□□ -0.23
CCDC42-202ENST00000539522 SIX6OS1Q8N1H7 587 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 ZNF276Q8N554 614 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 PDZD8Q8NEN9 1154 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 IRGQQ8WZA9 623 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 P2RY11Q96G91 374 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 SLC2A13Q96QE2 648 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 C11orf70Q9BRQ4 267 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 RAB6CQ9H0N0 254 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 ISCUQ9H1K1 167 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 TRPC7Q9HCX4 862 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 TLR8Q9NR97 1041 aaKnown RBP13.62□□□□□ -0.23
CCDC42-202ENST00000539522 CLIC5Q9NZA1 410 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 PRKAG3Q9UGI9 489 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 LIMD1Q9UGP4 676 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 NAGPAQ9UK23 515 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 TMEM59LQ9UK28 342 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 PYCARDQ9ULZ3 195 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 NAALADL1Q9UQQ1 740 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 BZW2Q9Y6E2 419 aaKnown RBP13.62□□□□□ -0.23
CCDC42-202ENST00000539522 NUMBLQ9Y6R0 609 aa13.62□□□□□ -0.23
CCDC42-202ENST00000539522 SOBPA7XYQ1 873 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 TMCO5BA8MYB1 307 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 ATMINO43313 823 aaPredicted RBP13.61□□□□□ -0.23
CCDC42-202ENST00000539522 TLR5O60602 858 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 GRAP2O75791 330 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 FBXO21O94952 628 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 ABL1P00519 1130 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 IGLV3-25P01717 112 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 LTFP02788 710 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 PPP3CCP48454 512 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 SLC7A9P82251 487 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 SLC6A3Q01959 620 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 GFPT1Q06210 699 aaPredicted RBP13.61□□□□□ -0.23
CCDC42-202ENST00000539522 MTF1Q14872 753 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 IER5LQ5T953 404 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 SLC26A9Q7LBE3 791 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 OTOP3Q7RTS5 596 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 ERICH1Q86X53 443 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 CCDC170Q8IYT3 715 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 MCOLN2Q8IZK6 566 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 TDRD5Q8NAT2 981 aaKnown RBP13.61□□□□□ -0.23
CCDC42-202ENST00000539522 JOSD2Q8TAC2 188 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 MRPS31Q92665 395 aaKnown RBP13.61□□□□□ -0.23
CCDC42-202ENST00000539522 SMARCD2Q92925 531 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 C18orf8Q96DM3 657 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 ASIC4Q96FT7 647 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 KXD1Q9BQD3 176 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 KLF16Q9BXK1 252 aaPredicted RBP13.61□□□□□ -0.23
CCDC42-202ENST00000539522 PDCL3Q9H2J4 239 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 GKN1Q9NS71 199 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 KCND1Q9NSA2 647 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 EHD2Q9NZN4 543 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 BDP1A6H8Y1 2624 aa13.61□□□□□ -0.23
CCDC42-202ENST00000539522 TICRRQ7Z2Z1 1910 aa13.6□□□□□ -0.23
CCDC42-202ENST00000539522 SSU72P8A0A1W2PR75 194 aa13.6□□□□□ -0.23
CCDC42-202ENST00000539522 CCP110O43303 1012 aa13.6□□□□□ -0.23
CCDC42-202ENST00000539522 GZMAP12544 262 aa13.6□□□□□ -0.23
CCDC42-202ENST00000539522 HDCP19113 662 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms