RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 GREM1O60565 184 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 FYNP06241 537 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 TCF3P15923 654 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 KRT9P35527 623 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 STAT1P42224 750 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 TPM4P67936 248 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 TAF5Q15542 800 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 MEA1Q16626 185 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 PTPN20Q4JDL3 420 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 ARHGAP29Q52LW3 1261 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 TMEM31Q5JXX7 168 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 C10orf120Q5SQS8 335 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 BSPRYQ5W0U4 402 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 TMEM110Q86TL2 294 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 GAS2L3Q86XJ1 694 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 OLIG1Q8TAK6 271 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 STK32AQ8WU08 396 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 IRF7Q92985 503 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 PBXIP1Q96AQ6 731 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 CHFRQ96EP1 664 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 XPO4Q9C0E2 1151 aaKnown RBP16.53■□□□□ 0.24
RPAIN-206ENST00000539417 LHX5Q9H2C1 402 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 CNGB3Q9NQW8 809 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 CLIC5Q9NZA1 410 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 MTF2Q9Y483 593 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-206ENST00000539417 PI15O43692 258 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 ERBB2P04626 1255 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 ATP5C1P36542 298 aaKnown RBP16.52■□□□□ 0.23
RPAIN-206ENST00000539417 VCPP55072 806 aaKnown RBP16.52■□□□□ 0.23
RPAIN-206ENST00000539417 BPIFB4P59827 614 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 FMO1Q01740 532 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 EFEMP1Q12805 493 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 MLF2Q15773 248 aaPredicted RBP16.52■□□□□ 0.23
RPAIN-206ENST00000539417 C2CD6Q53TS8 623 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 NAIF1Q69YI7 327 aaPredicted RBP16.52■□□□□ 0.23
RPAIN-206ENST00000539417 MIB1Q86YT6 1006 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 SCML4Q8N228 414 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 PCDHB18PQ96TA0 734 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 FOXQ1Q9C009 403 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 RBSNQ9H1K0 784 aa16.52■□□□□ 0.23
RPAIN-206ENST00000539417 HMBSP08397 361 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 PSEN1P49768 467 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 PDE6CP51160 858 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 EML3Q32P44 896 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 BTBD8Q5XKL5 378 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 SMYD5Q6GMV2 418 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 TXNDC11Q6PKC3 985 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 TPRG1Q6ZUI0 275 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 CACNA2D4Q7Z3S7 1137 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 BMP8AQ7Z5Y6 402 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 FLCNQ8NFG4 579 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 OSCP1Q8WVF1 389 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 DNASE1L2Q92874 299 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 PPP1R13BQ96KQ4 1090 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 C1QTNF1Q9BXJ1 281 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 NACA2Q9H009 215 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 TBC1D17Q9HA65 648 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 TRPV5Q9NQA5 729 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 DUS2Q9NX74 493 aaKnown RBP16.51■□□□□ 0.23
RPAIN-206ENST00000539417 SFMBT1Q9UHJ3 866 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 RASAL2Q9UJF2 1139 aa16.51■□□□□ 0.23
RPAIN-206ENST00000539417 LRRC53A6NM62 1247 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 PRR33A8MZF0 331 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 RALAP11233 206 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 CDH5P33151 784 aaPredicted RBP16.5■□□□□ 0.23
RPAIN-206ENST00000539417 NOMO3P69849 1222 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 PFKPQ01813 784 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 FAM183BPQ6ZVS7 135 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 IRF2BP2Q7Z5L9 587 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 BBS7Q8IWZ6 715 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 ZNF276Q8N554 614 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 CPA5Q8WXQ8 436 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 P2RY11Q96G91 374 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 THG1LQ9NWX6 298 aaKnown RBP16.5■□□□□ 0.23
RPAIN-206ENST00000539417 DNMT3LQ9UJW3 386 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 DAAM1Q9Y4D1 1078 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 PIAS3Q9Y6X2 628 aa16.5■□□□□ 0.23
RPAIN-206ENST00000539417 MSI1O43347 362 aaKnown RBP16.49■□□□□ 0.23
RPAIN-206ENST00000539417 LTFP02788 710 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 KLKB1P03952 638 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 ACADSBP45954 432 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 STARD6P59095 220 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 PITX1P78337 314 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-206ENST00000539417 CDR2Q01850 454 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 RUNX3Q13761 415 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 SYPL2Q5VXT5 272 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 NAA35Q5VZE5 725 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 CC2D1AQ6P1N0 951 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-206ENST00000539417 KLHDC10Q6PID8 442 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 ARHGAP18Q8N392 663 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 TMEM105Q8N8V8 129 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 IRGQQ8WZA9 623 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 DDX23Q9BUQ8 820 aaKnown RBP16.49■□□□□ 0.23
RPAIN-206ENST00000539417 PDCL3Q9H2J4 239 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 NAALADL1Q9UQQ1 740 aa16.49■□□□□ 0.23
RPAIN-206ENST00000539417 STC2O76061 302 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 FBXO21O94952 628 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 IFNAR2P48551 515 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 PLCB2Q00722 1185 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 GAB4Q2WGN9 574 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms