RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 SYT15Q9BQS2 421 aa12.81□□□□□ -0.36
YBX3-207ENST00000539204 USP36Q9P275 1121 aaKnown RBP12.81□□□□□ -0.36
YBX3-207ENST00000539204 CDH9Q9ULB4 789 aa12.81□□□□□ -0.36
YBX3-207ENST00000539204 ANKRD6Q9Y2G4 727 aa12.81□□□□□ -0.36
YBX3-207ENST00000539204 PCDHGA1Q9Y5H4 931 aa12.81□□□□□ -0.36
YBX3-207ENST00000539204 SNX11Q9Y5W9 270 aa12.81□□□□□ -0.36
YBX3-207ENST00000539204 PIEZO2Q9H5I5 2752 aa12.81□□□□□ -0.36
YBX3-207ENST00000539204 MYH11P35749 1972 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 KCNJ18B7U540 433 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 PYCARD-AS1I3L0S3 204 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 LAD1O00515 517 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 KCNK3O14649 394 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 FAM13AO94988 1023 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 KRT19P08727 400 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 PDGFRBP09619 1106 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 ACADMP11310 421 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 LMO2P25791 158 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 ACTN2P35609 894 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 PSMC1P62191 440 aaKnown RBP12.8□□□□□ -0.36
YBX3-207ENST00000539204 RBP5P82980 135 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 GTF2BQ00403 316 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 CCDC173Q0VFZ6 552 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 IL17AQ16552 155 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 SOWAHAQ2M3V2 549 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 INAVAQ3KP66 663 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 HYIQ5T013 277 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 CRELD2Q6UXH1 353 aaPredicted RBP12.8□□□□□ -0.36
YBX3-207ENST00000539204 TMPRSS6Q8IU80 811 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 C1orf127Q8N9H9 656 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 SIPA1Q96FS4 1042 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 CDK5RAP3Q96JB5 506 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 C8orf76Q96K31 380 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 C8orf48Q96LL4 319 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 DUSP9Q99956 384 aaKnown RBP12.8□□□□□ -0.36
YBX3-207ENST00000539204 MKRN2Q9H000 416 aaKnown RBP12.8□□□□□ -0.36
YBX3-207ENST00000539204 PARVGQ9HBI0 331 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 WDR35Q9P2L0 1181 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 CHORDC1Q9UHD1 332 aaPredicted RBP12.8□□□□□ -0.36
YBX3-207ENST00000539204 R3HCC1Q9Y3T6 440 aaKnown RBP12.8□□□□□ -0.36
YBX3-207ENST00000539204 STYXL1Q9Y6J8 313 aa12.8□□□□□ -0.36
YBX3-207ENST00000539204 TISP43B9A030 160 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 NEDD8-MDP1E9PL57 170 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 F8VP50 259 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 COCHO43405 550 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 C6P13671 934 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 TYRP14679 529 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 YWHAQP27348 245 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 PRPHP41219 470 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 IL12RB1P42701 662 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 CCT8P50990 548 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 ZNF132P52740 706 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 SRSF1Q07955 248 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■□□□□ 10.8
YBX3-207ENST00000539204 IFRD2Q12894 506 aaPredicted RBP12.79□□□□□ -0.36
YBX3-207ENST00000539204 POSTNQ15063 836 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 FUT11Q495W5 492 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 HECTD3Q5T447 861 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 SPACA3Q8IXA5 215 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 PDZD8Q8NEN9 1154 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 MYCBPAPQ8TBZ2 947 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 POMGNT1Q8WZA1 660 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 SNX19Q92543 992 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 PRCCQ92733 491 aaPredicted RBP12.79□□□□□ -0.36
YBX3-207ENST00000539204 IGSF8Q969P0 613 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 PCED1BQ96HM7 432 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
YBX3-207ENST00000539204 REEP2Q9BRK0 252 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 BBS2Q9BXC9 721 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 CRTAC1Q9NQ79 661 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 ITGA11Q9UKX5 1188 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 STON1Q9Y6Q2 735 aa12.79□□□□□ -0.36
YBX3-207ENST00000539204 CACNG3O60359 315 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 DFNA5O60443 496 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 SYNCRIPO60506 623 aaKnown RBP12.78□□□□□ -0.36
YBX3-207ENST00000539204 DGKGP49619 791 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 CLDN6P56747 220 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 KCNH2Q12809 1159 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 TPGS1Q6ZTW0 290 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 USP49Q70CQ1 688 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
YBX3-207ENST00000539204 HS2ST1Q7LGA3 356 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 FMNL3Q8IVF7 1028 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 PCED1AQ9H1Q7 454 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 ZHX3Q9H4I2 956 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 UNC79Q9P2D8 2635 aa12.78□□□□□ -0.36
YBX3-207ENST00000539204 H0Y8X5 98 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 ENC1O14682 589 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 BRINP1O60477 761 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 RFPL3O75679 317 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
YBX3-207ENST00000539204 LDOC1O95751 146 aaPredicted RBP12.77□□□□□ -0.37
YBX3-207ENST00000539204 KRT18P05783 430 aaKnown RBP12.77□□□□□ -0.37
YBX3-207ENST00000539204 CISD3P0C7P0 127 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 GRIA4P48058 902 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 ZNF131P52739 623 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 PKDCCQ504Y2 493 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 SCARA3Q6AZY7 606 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 HTR3DQ70Z44 454 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 GPBP1Q86WP2 473 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 NUP93Q8N1F7 819 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 CXorf38Q8TB03 319 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms