RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 TADA2BQ86TJ2 420 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 MON1AQ86VX9 555 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 MRPL43Q8N983 215 aaKnown RBP16.11■□□□□ 0.17
VAMP1-207ENST00000539047 SCAMP5Q8TAC9 235 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 FAM172AQ8WUF8 416 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 RBM41Q96IZ5 413 aaKnown RBP16.11■□□□□ 0.17
VAMP1-207ENST00000539047 CFAP57Q96MR6 1250 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 KLHL5Q96PQ7 755 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 SLC2A13Q96QE2 648 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 CDK5RAP1Q96SZ6 601 aaKnown RBP16.11■□□□□ 0.17
VAMP1-207ENST00000539047 PSMB7Q99436 277 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 DDX23Q9BUQ8 820 aaKnown RBP16.11■□□□□ 0.17
VAMP1-207ENST00000539047 PBX4Q9BYU1 374 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 CARD9Q9H257 536 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 FAM204AQ9H8W3 233 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 OLA1Q9NTK5 396 aaKnown RBP16.11■□□□□ 0.17
VAMP1-207ENST00000539047 UXTQ9UBK9 157 aaPredicted RBP16.11■□□□□ 0.17
VAMP1-207ENST00000539047 YBX2Q9Y2T7 364 aaKnown RBP16.11■□□□□ 0.17
VAMP1-207ENST00000539047 PCDHA3Q9Y5H8 950 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 INSL5Q9Y5Q6 135 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 MRFAP1Q9Y605 127 aa16.11■□□□□ 0.17
VAMP1-207ENST00000539047 C2orf71A6NGG8 1288 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 YJEFN3A6XGL0 299 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 E7ENQ6 273 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 H3BNC9 293 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 SOAT2O75908 522 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 F9P00740 461 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 KRT1P04264 644 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 ERVFC1P60507 584 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 AMPD2Q01433 879 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 TAF5Q15542 800 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 BSPRYQ5W0U4 402 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 POTEHQ6S545 545 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 RTL10Q7L3V2 364 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 CCDC50Q8IVM0 306 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 CEP112Q8N8E3 955 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 GIPC2Q8TF65 315 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 OVCA2Q8WZ82 227 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
VAMP1-207ENST00000539047 ASB3Q9Y575 518 aa16.1■□□□□ 0.17
VAMP1-207ENST00000539047 M0QYT0 321 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 FSCN2O14926 492 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 FANCGO15287 622 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 GRM6O15303 877 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 TGM5O43548 720 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 CEP104O60308 925 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 LRCH4O75427 683 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 SEC24AO95486 1093 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 VNN2O95498 520 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 C1RP00736 705 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 ATF6P18850 670 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 CXCR5P32302 372 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 RDXP35241 583 aaKnown RBP16.09■□□□□ 0.17
VAMP1-207ENST00000539047 DEUP1Q05D60 604 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 TWF1Q12792 350 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 C15orf59Q2T9L4 293 aaPredicted RBP16.09■□□□□ 0.17
VAMP1-207ENST00000539047 CCDC14Q49A88 953 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 SCYL2Q6P3W7 929 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 KATNAL2Q8IYT4 538 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 STKLD1Q8NE28 680 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 SLC7A14Q8TBB6 771 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 GPR152Q8TDT2 470 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 NDRG1Q92597 394 aaKnown RBP16.09■□□□□ 0.17
VAMP1-207ENST00000539047 CD101Q93033 1021 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 CAPZA3Q96KX2 299 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 TBCBQ99426 244 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 TTLL2Q9BWV7 592 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 CRISPLD1Q9H336 500 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 ZWILCHQ9H900 591 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 GMIPQ9P107 970 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 FBXW11Q9UKB1 542 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 USP18Q9UMW8 372 aa16.09■□□□□ 0.17
VAMP1-207ENST00000539047 PGRMC1O00264 195 aaKnown RBP16.08■□□□□ 0.16
VAMP1-207ENST00000539047 DDX3YO15523 660 aaKnown RBP16.08■□□□□ 0.16
VAMP1-207ENST00000539047 MIPP30301 263 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 PBX2P40425 430 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 PPP3CCP48454 512 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 ARL13BQ3SXY8 428 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 PPM1LQ5SGD2 360 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 HFE2Q6ZVN8 426 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 KREMEN2Q8NCW0 462 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 EXD1Q8NHP7 514 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 MAIP1Q8WWC4 291 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 ARNTL2Q8WYA1 636 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 EDEM1Q92611 657 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 KRT35Q92764 455 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.16
VAMP1-207ENST00000539047 TRMT2BQ96GJ1 504 aaKnown RBP16.08■□□□□ 0.16
VAMP1-207ENST00000539047 RPGRIP1Q96KN7 1286 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 ZNF512Q96ME7 567 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-207ENST00000539047 GCNAQ96QF7 691 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 NPY6RQ99463 290 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 L2HGDHQ9H9P8 463 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 DDIT4Q9NX09 232 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 CLIC5Q9NZA1 410 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 IL37Q9NZH6 218 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 NAALADL1Q9UQQ1 740 aa16.08■□□□□ 0.16
VAMP1-207ENST00000539047 COL6A3P12111 3177 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms