RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ADORA2BP29275 332 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 P2RY2P41231 377 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 VAMP7P51809 220 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 NFIL3Q16649 462 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 BTBD8Q5XKL5 378 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 CLEC20AQ6ZU45 233 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 TMEM25Q86YD3 366 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 NAT16Q8N8M0 369 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 KDF1Q8NAX2 398 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-206ENST00000538970 RLN3Q8WXF3 142 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 SPATA32Q96LK8 384 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 HNRNPABQ99729 332 aaKnown RBP13.22□□□□□ -0.29
VAMP1-206ENST00000538970 TMEM121BQ9BXQ6 578 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-206ENST00000538970 APOBEC3GQ9HC16 384 aaKnown RBP13.22□□□□□ -0.29
VAMP1-206ENST00000538970 POLMQ9NP87 494 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-206ENST00000538970 CYLDQ9NQC7 956 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 TLR8Q9NR97 1041 aaKnown RBP13.22□□□□□ -0.29
VAMP1-206ENST00000538970 SPHK2Q9NRA0 654 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 NBEAQ8NFP9 2946 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 SETXQ7Z333 2677 aaKnown RBP13.21□□□□□ -0.29
VAMP1-206ENST00000538970 TCRBV21S2A2A0A5A6 115 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 HHLA1C9JL84 531 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 CYP26A1O43174 497 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 KIF20AO95235 890 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 KCNK5O95279 499 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 TBX18O95935 607 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 TOP3BO95985 862 aaKnown RBP13.21□□□□□ -0.29
VAMP1-206ENST00000538970 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 SYKP43405 635 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 GCLMP48507 274 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 DHPSP49366 369 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-206ENST00000538970 NDUFA8P51970 172 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 KRT85P78386 507 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 RING1Q06587 406 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 PPP3CAQ08209 521 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 DPYDQ12882 1025 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 ANO4Q32M45 955 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 C10orf76Q5T2E6 689 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 HTR3DQ70Z44 454 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 INTS8Q75QN2 995 aaKnown RBP13.21□□□□□ -0.29
VAMP1-206ENST00000538970 ZNF513Q8N8E2 541 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-206ENST00000538970 TERB1Q8NA31 727 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 TAS1R2Q8TE23 839 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 HMGB4Q8WW32 186 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 JAKMIP2Q96AA8 810 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 SPACA7Q96KW9 195 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 KLF16Q9BXK1 252 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-206ENST00000538970 IMPG2Q9BZV3 1241 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 PNPLA8Q9NP80 782 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.29
VAMP1-206ENST00000538970 OSER1Q9NX31 292 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
VAMP1-206ENST00000538970 DEC1Q9P2X7 70 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 HCN2Q9UL51 889 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 SCML2Q9UQR0 700 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 ZDHHC9Q9Y397 364 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 SDK1Q7Z5N4 2213 aa13.21□□□□□ -0.29
VAMP1-206ENST00000538970 SRRM3A6NNA2 597 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 C4orf47A7E2U8 309 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 PATE3B3GLJ2 98 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 KHNYNO15037 678 aaKnown RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 TRIM24O15164 1050 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 CILPO75339 1184 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 ZIC2O95409 532 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 TRIM21P19474 475 aaKnown RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 ATP5C1P36542 298 aaKnown RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 ENPEPQ07075 957 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 MAP7D1Q3KQU3 841 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 PREPLQ4J6C6 727 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 PSAPL1Q6NUJ1 521 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 LPCAT2Q7L5N7 544 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 TRMT11Q7Z4G4 463 aaKnown RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 FAM186BQ8IYM0 893 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 FRMD1Q8N878 549 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 CCDC47Q96A33 483 aaKnown RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 CYFIP2Q96F07 1278 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 CYP3A43Q9HB55 503 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 MARK1Q9P0L2 795 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 MBD1Q9UIS9 605 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-206ENST00000538970 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 PCDHA5Q9Y5H7 936 aa13.2□□□□□ -0.3
VAMP1-206ENST00000538970 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
VAMP1-206ENST00000538970 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 GIPC1O14908 333 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 CACNG3O60359 315 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 KRT13P13646 458 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 CD58P19256 250 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 ACO1P21399 889 aaKnown RBP13.19□□□□□ -0.3
VAMP1-206ENST00000538970 PTGER3P43115 390 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms