RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 TCEA2Q15560 299 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 TMED8Q6PL24 325 aaPredicted RBP2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 TMEM108Q6UXF1 575 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 GADL1Q6ZQY3 521 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 NIM1KQ8IY84 436 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 PPM1NQ8N819 430 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 RP9Q8TA86 221 aaKnown RBP2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 GLG1Q92896 1179 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 MAP4K1Q92918 833 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 NINJ1Q92982 152 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 TTC3P53804 2025 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 ACEP12821 1306 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 TTC21BQ7Z4L5 1316 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 TTC21AQ8NDW8 1320 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 BRWD3Q6RI45 1802 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 SBF2Q86WG5 1849 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 RTL1A6NKG5 1358 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 ARHGEF10O15013 1369 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 LRRC37A3O60309 1634 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 NSD2O96028 1365 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 KIF24Q5T7B8 1368 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 ATRNO75882 1429 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 TOGARAM1Q9Y4F4 1720 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 COL5A2P05997 1499 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 CDK12Q9NYV4 1490 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 RGPD3A6NKT7 1758 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 SIPA1L3O60292 1781 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 RGPD4Q7Z3J3 1758 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 TOM1O60784 492 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 ANXA1P04083 346 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 BPIP17213 487 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 RHCEP18577 417 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 HSPA1LP34931 641 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 TOB1P50616 345 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 TMF1P82094 1093 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 HABP2Q14520 560 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 NFATC4Q14934 902 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 TKFCQ3LXA3 575 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 TBC1D25Q3MII6 688 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 GLIPR1L2Q4G1C9 344 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 AWAT1Q58HT5 328 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 ICE2Q659A1 982 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 MMP21Q8N119 569 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 DDX17Q92841 729 aaKnown RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 ZFYVE19Q96K21 471 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 LENG8Q96PV6 779 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 MEIS3Q99687 375 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 CNPPD1Q9BV87 410 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 SLC12A5Q9H2X9 1139 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 GLOD4Q9HC38 313 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 SLAMF7Q9NQ25 335 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 STK26Q9P289 416 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 RGS17Q9UGC6 210 aaPredicted RBP2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 AGAP1Q9UPQ3 857 aa2.34□□□□□ -2.03
CBX3P4-201ENST00000538909 KDRP35968 1356 aa2.34□□□□□ -2.04
CBX3P4-201ENST00000538909 TNS1Q9HBL0 1735 aaKnown RBP2.34□□□□□ -2.04
CBX3P4-201ENST00000538909 BCL9O00512 1426 aa2.34□□□□□ -2.04
CBX3P4-201ENST00000538909 BLMP54132 1417 aaPredicted RBP2.34□□□□□ -2.04
CBX3P4-201ENST00000538909 DLG5Q8TDM6 1919 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 PAPPAQ13219 1627 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 A1L4Q6 167 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 FYB1O15117 783 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 ZNF432O94892 652 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 GJB1P08034 283 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 FGF3P11487 239 aaPredicted RBP2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 ATF3P18847 181 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 CDC42EP1Q00587 391 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 CCDC93Q567U6 631 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 SOGA3Q5TF21 947 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 NUDCD2Q8WVJ2 157 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 ATG4AQ8WYN0 398 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 NLRP4Q96MN2 994 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 THAP7Q9BT49 309 aaPredicted RBP2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 OSBPL2Q9H1P3 480 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 BRD9Q9H8M2 597 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 VTA1Q9NP79 307 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 CCM2LQ9NUG4 571 aaPredicted RBP2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 TFCP2L1Q9NZI6 479 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 ZNF831Q5JPB2 1677 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 KTN1Q86UP2 1357 aaKnown RBP2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 FNDC1Q4ZHG4 1894 aaPredicted RBP2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 MRC1P22897 1456 aa2.33□□□□□ -2.04
CBX3P4-201ENST00000538909 RREB1Q92766 1687 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 LY75O60449 1722 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 COL24A1Q17RW2 1714 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 UBR2Q8IWV8 1755 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 SCN11AQ9UI33 1791 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 IGLV5-39A0A0G2JS06 123 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 ACOT8O14734 319 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 SOCS5O75159 536 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 CTSAP10619 480 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 PHKA1P46020 1223 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 MTNR1BP49286 362 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 RRP1P56182 461 aaKnown RBP2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 RPL36AP83881 106 aaKnown RBP2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 MTX1Q13505 466 aa2.32□□□□□ -2.04
CBX3P4-201ENST00000538909 BOP1Q14137 746 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms