RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PRMT7Q9NVM4 692 aaPredicted RBP15.15■□□□□ 0.02
CDCA3-207ENST00000538862 C15orf41Q9Y2V0 281 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 IQANK1A0A1B0GTG1 560 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 TRAFD1O14545 582 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-207ENST00000538862 HGSO14964 777 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-207ENST00000538862 HNRNPCL1O60812 293 aaKnown RBP15.14■□□□□ 0.01
CDCA3-207ENST00000538862 FGFR1P11362 822 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 TFDP2Q14188 446 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 NOMO1Q15155 1222 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 FAM187BQ17R55 369 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 ACCSLQ4AC99 568 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 EFCAB12Q6NXP0 572 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 GPATCH11Q8N954 259 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 CXorf38Q8TB03 319 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 TCP10LQ8TDR4 215 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 HSPH1Q92598 858 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 RSRC1Q96IZ7 334 aaKnown RBP15.14■□□□□ 0.01
CDCA3-207ENST00000538862 SPATA33Q96N06 139 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 TWNKQ96RR1 684 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 ADPGKQ9BRR6 497 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 CNPY3Q9BT09 278 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 FRMD8Q9BZ67 464 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-207ENST00000538862 ASB7Q9H672 318 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 SMYD3Q9H7B4 428 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 SAR1AQ9NR31 198 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 DONSONQ9NYP3 566 aa15.14■□□□□ 0.01
CDCA3-207ENST00000538862 LACTBL1A8MY62 500 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 DUSP11O75319 330 aaKnown RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 NFICP08651 508 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 C6orf222P0C671 652 aaPredicted RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 TROVE2P10155 538 aaKnown RBP eCLIP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 MCF2P10911 925 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 SMPD1P17405 629 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 ADRA1DP25100 572 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 BASP1P80723 227 aaKnown RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 ROR1Q01973 937 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 TAF5Q15542 800 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 DARS2Q6PI48 645 aaKnown RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 RNF180Q86T96 592 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 TMEM192Q8IY95 271 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 TTC39CQ8N584 583 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 N4BP2L2Q92802 583 aaPredicted RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 UTP4Q969X6 686 aaKnown RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 THOC1Q96FV9 657 aaKnown RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 CALN1Q9BXU9 219 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 TRIOBPQ9H2D6 2365 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 A8MUI8 341 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 M0QYV0 167 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 CHADO15335 359 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 ITGB3P05106 788 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 STAG3L1P0CL83 205 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 T-ENOLP0DO92 83 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 SYN1P17600 705 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 GPD1P21695 349 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 CCNG1P51959 295 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 BEX3Q00994 111 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 KCNJ11Q14654 390 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 KYAT1Q16773 422 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 JADE1Q6IE81 842 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 NLRP9Q7RTR0 991 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 CDR2LQ86X02 465 aaPredicted RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 NSMCE1Q8WV22 266 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 ADAM33Q9BZ11 813 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 MANSC1Q9H8J5 431 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 MINDY3Q9H8M7 445 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 PNPLA8Q9NP80 782 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 KIAA1257Q9ULG3 409 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 RPL26L1Q9UNX3 145 aaKnown RBP15.13■□□□□ 0.01
CDCA3-207ENST00000538862 TEX264Q9Y6I9 313 aa15.13■□□□□ 0.01
CDCA3-207ENST00000538862 C2CD4BA6NLJ0 364 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 MT-ND3P03897 115 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 DHRS4L1P0CG22 281 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 TARSP26639 723 aaKnown RBP15.12■□□□□ 0.01
CDCA3-207ENST00000538862 ELK3P41970 407 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 CDH6P55285 790 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 SLC18A2Q05940 514 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 FAM102AQ5T9C2 384 aaPredicted RBP15.12■□□□□ 0.01
CDCA3-207ENST00000538862 CCDC62Q6P9F0 684 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 CHSY1Q86X52 802 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 MAP7D3Q8IWC1 876 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 TRAPPC12Q8WVT3 735 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 SLC44A1Q8WWI5 657 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 SLC7A6OSQ96CW6 309 aaPredicted RBP15.12■□□□□ 0.01
CDCA3-207ENST00000538862 VTA1Q9NP79 307 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 HMGXB4Q9UGU5 601 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 HAO1Q9UJM8 370 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 GNEQ9Y223 722 aaKnown RBP15.12■□□□□ 0.01
CDCA3-207ENST00000538862 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 IKBKGQ9Y6K9 419 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 EVPLQ92817 2033 aa15.12■□□□□ 0.01
CDCA3-207ENST00000538862 FAM155BO75949 473 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 STAU1O95793 577 aaKnown RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 IQCF3P0C7M6 154 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 PHKA2P46019 1235 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 SLC8A3P57103 927 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 ZNF200P98182 395 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 INCA1Q0VD86 236 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 ORC1Q13415 861 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 PDK2Q15119 407 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms