RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ARHGEF3Q9NR81 526 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 SPATA2Q9UM82 520 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 CNTNAP5Q8WYK1 1306 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 ZNF335Q9H4Z2 1342 aaPredicted RBP7.13□□□□□ -1.27
SORT1-209ENST00000538502 NPHP3-ACAD11A0A0J9YXS1 232 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 FAM220BPB1ANY3 271 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 TPBGLP0DKB5 382 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 AKR1B1P15121 316 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 ALOX12P18054 663 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 EPHB2P29323 1055 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 ARPP19P56211 112 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 MGAT5Q09328 741 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 TSC22D1Q15714 1073 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 SAMD3Q8N6K7 520 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 AMER2Q8N7J2 671 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 AGAP3Q96P47 875 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 KLF6Q99612 283 aaPredicted RBP7.13□□□□□ -1.27
SORT1-209ENST00000538502 SLC25A23Q9BV35 468 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 C6orf62Q9GZU0 229 aaPredicted RBP7.13□□□□□ -1.27
SORT1-209ENST00000538502 MOV10Q9HCE1 1003 aaKnown RBP7.13□□□□□ -1.27
SORT1-209ENST00000538502 CAPN6Q9Y6Q1 641 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 FRMPD1Q5SYB0 1578 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 A0A087X1B8 175 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 CCDC182A6NF36 153 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 MEI4A8MW99 385 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 TMEM114B3SHH9 223 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 F5H423 210 aaPredicted RBP7.13□□□□□ -1.27
SORT1-209ENST00000538502 PROSCO94903 275 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 GLI1P08151 1106 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 SLC2A3P11169 496 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 NPR3P17342 541 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 ADSSP30520 456 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 KCNJ1P48048 391 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 TRAP1Q12931 704 aaKnown RBP7.13□□□□□ -1.27
SORT1-209ENST00000538502 TRAF2Q12933 501 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 PRKG1Q13976 671 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 ERMARDQ5T6L9 678 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 SCARA3Q6AZY7 606 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 RNFT2Q96EX2 444 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 ZNF341Q9BYN7 854 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 EPB41L4AQ9HCS5 686 aaPredicted RBP7.13□□□□□ -1.27
SORT1-209ENST00000538502 SLC38A7Q9NVC3 462 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 SFMBT1Q9UHJ3 866 aa7.13□□□□□ -1.27
SORT1-209ENST00000538502 H3BNX3 289 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 NR5A2O00482 541 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 ERFP50548 548 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CUL2Q13617 745 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 TTC23Q5W5X9 447 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 SPOCD1Q6ZMY3 1216 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 MINDY2Q8NBR6 621 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 BTN2A2Q8WVV5 523 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 ASZ1Q8WWH4 475 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 VCPIP1Q96JH7 1222 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 DCLK3Q9C098 648 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 JPH1Q9HDC5 661 aaPredicted RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 SQORQ9Y6N5 450 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 VPS26AO75436 327 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 ATG7O95352 703 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CYP2D6P10635 497 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 GARTP22102 1010 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 FOXO4P98177 505 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 TNK2Q07912 1038 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 USP39Q53GS9 565 aaKnown RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 SCN4BQ8IWT1 228 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 KRT78Q8N1N4 520 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 AGAP11Q8TF27 550 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 C17orf50Q8WW18 174 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 DUSP12Q9UNI6 340 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 GSTK1Q9Y2Q3 226 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 IQSEC2Q5JU85 1478 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 SNX3O60493 162 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 STX11O75558 287 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 PGM3O95394 542 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 GH2P01242 217 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 PTPN7P35236 360 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 SOAT1P35610 550 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 IFNGR2P38484 337 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 PTDSS1P48651 473 aaKnown RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 FUT11Q495W5 492 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 LACTB2Q53H82 288 aaPredicted RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 COBLL1Q53SF7 1204 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 GPAT2Q6NUI2 795 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 TTI2Q6NXR4 508 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CDC73Q6P1J9 531 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 PMF1Q6P1K2 205 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 DHDDSQ86SQ9 333 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 SPATA2LQ8IUW3 424 aaPredicted RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 ADHFE1Q8IWW8 467 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 FBXL16Q8N461 479 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 ZCCHC9Q8N567 271 aaKnown RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 TMC2Q8TDI7 906 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 ACAD9Q9H845 621 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 WWOXQ9NZC7 414 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 NDUFAF1Q9Y375 327 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 HECW2Q9P2P5 1572 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 NEXMIFQ5QGS0 1516 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 SASH3O75995 380 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CAMTA2O94983 1202 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 PGAM1P18669 254 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 RAP1GAPP47736 663 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms