RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 HADHBP55084 474 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GSCP56915 257 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 DEUP1Q05D60 604 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TAF10Q12962 218 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 NME3Q13232 169 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ACAP1Q15027 740 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TAF5Q15542 800 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PABPC1LQ4VXU2 614 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RAB41Q5JT25 222 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 BSPRYQ5W0U4 402 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 OLFML1Q6UWY5 402 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 NYAP1Q6ZVC0 841 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GPRIN1Q7Z2K8 1008 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SPRED2Q7Z698 418 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CCDC50Q8IVM0 306 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RHOT1Q8IXI2 618 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TCEAL8Q8IYN2 117 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 EDEM1Q92611 657 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CFAP57Q96MR6 1250 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CNPY3Q9BT09 278 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PLEKHA4Q9H4M7 779 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ZWILCHQ9H900 591 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ABCC13Q9NSE7 274 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RRN3Q9NYV6 651 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PCSK1NQ9UHG2 260 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SALL4Q9UJQ4 1053 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SCML2Q9UQR0 700 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ASB3Q9Y575 518 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 IRAK3Q9Y616 596 aa11.15□□□□□ -0.62
TNFRSF1A-211ENST00000538363 A0A1W2PQH9 124 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CCDC66A2RUB6 948 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 YJEFN3A6XGL0 299 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HHLA1C9JL84 531 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 E7ENQ6 273 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 M0QYT0 321 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KCNK3O14649 394 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NCK2O43639 380 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LILRB3O75022 631 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CLASP2O75122 1294 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 F9P00740 461 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LINC00271P0C7V0 271 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MYL4P12829 197 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 IRS1P35568 1242 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NRIP1P48552 1158 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RPL34P49207 117 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ARL13BQ3SXY8 428 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SEL1L2Q5TEA6 688 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DNAJB7Q7Z6W7 309 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 FAM172AQ8WUF8 416 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 WDR24Q96S15 920 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CDK5RAP1Q96SZ6 601 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PSMB7Q99436 277 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 GOLPH3Q9H4A6 298 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MAN1C1Q9NR34 630 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 OLA1Q9NTK5 396 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 GMIPQ9P107 970 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SLC12A6Q9UHW9 1150 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PACSIN2Q9UNF0 486 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NAALADL1Q9UQQ1 740 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PCDHGC5Q9Y5F6 944 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SAR1BQ9Y6B6 198 aa11.14□□□□□ -0.63
TNFRSF1A-211ENST00000538363 C2CD4BA6NLJ0 364 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RFXAPO00287 272 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 FSCN2O14926 492 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CCL16O15467 120 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CEP104O60308 925 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 FGF19O95750 216 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ATP1A1P05023 1023 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KRT7P08729 469 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RARGP13631 454 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PTPN2P17706 415 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TCP1P17987 556 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MAN1A1P33908 653 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PPP3CCP48454 512 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RWDD2BP57060 319 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TUBB2AQ13885 445 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KRT81Q14533 505 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 C15orf59Q2T9L4 293 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MEI1Q5TIA1 1274 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PM20D1Q6GTS8 502 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NT5DC3Q86UY8 548 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SCML4Q8N228 414 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KCTD6Q8NC69 237 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TTC16Q8NEE8 873 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 FNIP1Q8TF40 1166 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PBKQ96KB5 322 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CAPZA3Q96KX2 299 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CORO1BQ9BR76 489 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TUBB2BQ9BVA1 445 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MAK16Q9BXY0 300 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CRISPLD1Q9H336 500 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PRO3102Q9H379 93 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ZNF576Q9H609 170 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TRPC7Q9HCX4 862 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ASAH2Q9NR71 780 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TMEM30AQ9NV96 361 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DDIT4Q9NX09 232 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DDX56Q9NY93 547 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms