RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 TUBP50607 506 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 TNK2Q07912 1038 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 ZNF268Q14587 947 aaPredicted RBP13.73□□□□□ -0.21
CHFR-216ENST00000538235 ARID5BQ14865 1188 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 ASIC2Q16515 512 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 CLEC16AQ2KHT3 1053 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 GAB4Q2WGN9 574 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 RAB6CQ53S08 254 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 SYPL2Q5VXT5 272 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 BSPRYQ5W0U4 402 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 MMS22LQ6ZRQ5 1243 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 PHLDB2Q86SQ0 1253 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 XYLT1Q86Y38 959 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 PDZD8Q8NEN9 1154 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 SH3RF2Q8TEC5 729 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 PPP1R13BQ96KQ4 1090 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 RAB6CQ9H0N0 254 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 ZFP14Q9HCL3 533 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 CNGB3Q9NQW8 809 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 TLR8Q9NR97 1041 aaKnown RBP13.73□□□□□ -0.21
CHFR-216ENST00000538235 TDP1Q9NUW8 608 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 ARHGAP20Q9P2F6 1191 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 IGSF9Q9P2J2 1179 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 SORCS3Q9UPU3 1222 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 WNT6Q9Y6F9 365 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 ATG2BQ96BY7 2078 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 ZNF318Q5VUA4 2279 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 KRBA1A5PL33 1030 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 GRAP2O75791 330 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 LTFP02788 710 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 KLKB1P03952 638 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 IRF1P10914 325 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 MBL2P11226 248 aaPredicted RBP13.72□□□□□ -0.21
CHFR-216ENST00000538235 ARSAP15289 507 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 TCF3P15923 654 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 FERP16591 822 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 KRT9P35527 623 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 GABRB2P47870 512 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 SOX9P48436 509 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 BPIFB4P59827 614 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 ZXDAP98168 799 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 CENPCQ03188 943 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 TDGQ13569 410 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 HECTD3Q5T447 861 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 SPECC1LQ69YQ0 1117 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 MTSS1LQ765P7 747 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 MON1BQ7L1V2 547 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 TMC6Q7Z403 805 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 MFSD6LQ8IWD5 586 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 SIX6OS1Q8N1H7 587 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 C11orf70Q9BRQ4 267 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 EDEM3Q9BZQ6 932 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 CLIC5Q9NZA1 410 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 SFMBT1Q9UHJ3 866 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 NAALADL1Q9UQQ1 740 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 MUC22E2RYF6 1773 aaPredicted RBP13.72□□□□□ -0.21
CHFR-216ENST00000538235 F5P12259 2224 aa13.72□□□□□ -0.21
CHFR-216ENST00000538235 DOCK4Q8N1I0 1966 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 FAM86C2PA6NEL3 165 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 ANTXRLA6NF34 631 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 I6L893 689 aaPredicted RBP13.71□□□□□ -0.21
CHFR-216ENST00000538235 TNFRSF10AO00220 468 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 DCXO43602 365 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 MFAP3LO75121 409 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 MMP8P22894 467 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 GDI1P31150 447 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 AVPR1AP37288 418 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 ADKP55263 362 aaKnown RBP13.71□□□□□ -0.21
CHFR-216ENST00000538235 ZBED6P86452 979 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 EFEMP1Q12805 493 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 MTF1Q14872 753 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 SFMBT2Q5VUG0 894 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 MSANTD2Q6P1R3 559 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 TAC4Q86UU9 113 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 ZNF677Q86XU0 584 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 CELF5Q8N6W0 485 aaKnown RBP13.71□□□□□ -0.21
CHFR-216ENST00000538235 TTC16Q8NEE8 873 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 JOSD2Q8TAC2 188 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 TTC8Q8TAM2 541 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 ADAM32Q8TC27 787 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 BPIFB1Q8TDL5 484 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 DQX1Q8TE96 717 aaKnown RBP13.71□□□□□ -0.21
CHFR-216ENST00000538235 IRGQQ8WZA9 623 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 DNAJC7Q99615 494 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 FAM83CQ9BQN1 747 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 TRIM5Q9C035 493 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 DNAI2Q9GZS0 605 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 LINC00597Q9H2U6 94 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 CFAP97Q9P2B7 532 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.21
CHFR-216ENST00000538235 NYNRINQ9P2P1 1898 aaKnown RBP13.7□□□□□ -0.22
CHFR-216ENST00000538235 SOBPA7XYQ1 873 aa13.7□□□□□ -0.22
CHFR-216ENST00000538235 PI4K2BG5E9Z4 385 aa13.7□□□□□ -0.22
CHFR-216ENST00000538235 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
CHFR-216ENST00000538235 CBFA2T2O43439 604 aa13.7□□□□□ -0.22
CHFR-216ENST00000538235 STC2O76061 302 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms