RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 STK32AQ8WU08 396 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ZNF560Q96MR9 790 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 B3GNT5Q9BYG0 378 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 SENP6Q9GZR1 1112 aaPredicted RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ASNSD1Q9NWL6 643 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 DONSONQ9NYP3 566 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 SAE1Q9UBE0 346 aaPredicted RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ANAPC5Q9UJX4 755 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 L3MBTL1Q9Y468 752 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 SCN10AQ9Y5Y9 1956 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 XPOTO43592 962 aaKnown RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 HRO43593 1189 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ENDOD1O94919 500 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 CTSHP09668 335 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 PNPLA4P41247 253 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 SLC6A3Q01959 620 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 IZUMO3Q5VZ72 239 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 CCSAPQ6IQ19 270 aaPredicted RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ZNF365Q70YC5 407 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ANKS4BQ8N8V4 417 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 CCDC89Q8N998 374 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ANKRD52Q8NB46 1076 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 DDX23Q9BUQ8 820 aaKnown RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 MIS12Q9H081 205 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 CDC42EP4Q9H3Q1 356 aaKnown RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 MLXIPLQ9NP71 852 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 MIOSQ9NXC5 875 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 CST8O60676 142 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 RNF8O76064 485 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 RARBP10826 455 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 EZRP15311 586 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 DYNLT1P63172 113 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 KCNJ2P63252 427 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 CAV1Q03135 178 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 LMNB2Q03252 620 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 SV2CQ496J9 727 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 TLDC1Q6P9B6 456 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 GSTA5Q7RTV2 222 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 TRPM8Q7Z2W7 1104 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 RPAINQ86UA6 219 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 CCDC25Q86WR0 208 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 CCDC63Q8NA47 563 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 KLHDC9Q8NEP7 349 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 APPL2Q8NEU8 664 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 HSPH1Q92598 858 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 P3H4Q92791 437 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 STAMBPL1Q96FJ0 436 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 CFAP57Q96MR6 1250 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 TMEM109Q9BVC6 243 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 AGO3Q9H9G7 860 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 CACNG4Q9UBN1 327 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 HESX1Q9UBX0 185 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 ZNF148Q9UQR1 794 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 SMAPO00193 183 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 UBOX5O94941 541 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 ITGAVP06756 1048 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 WARSP23381 471 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 CALRP27797 417 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 ADORA2BP29275 332 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 TKTP29401 623 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 OTUD4Q01804 1114 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 CCDC142Q17RM4 750 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 TRMT10CQ7L0Y3 403 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 EXOC3L1Q86VI1 746 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 ADGRF2Q8IZF7 708 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 KCTD6Q8NC69 237 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 ACTL9Q8TC94 416 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 MAGEC3Q8TD91 643 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 CLEC4CQ8WTT0 213 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 MIEF2Q96C03 454 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 HHIPL1Q96JK4 782 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 SNX25Q9H3E2 840 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 C10orf88Q9H8K7 445 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 FAM105AQ9NUU6 356 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 DNAJC17Q9NVM6 304 aaKnown RBP11.2□□□□□ -0.62
CLIP1-210ENST00000538120 SAMD15Q9P1V8 674 aa11.2□□□□□ -0.62
CLIP1-210ENST00000538120 M0QZ92 97 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 ASGR1P07306 291 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 BST2Q10589 180 aaKnown RBP11.19□□□□□ -0.62
CLIP1-210ENST00000538120 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 ITIH4Q14624 930 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 KCNA10Q16322 511 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 P3H1Q32P28 736 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 FAM47CQ5HY64 1035 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 DNAJC14Q6Y2X3 702 aaPredicted RBP11.19□□□□□ -0.62
CLIP1-210ENST00000538120 TOP6BLQ8N6T0 577 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 RNF217Q8TC41 542 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 SLC2A14Q8TDB8 520 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 LPPQ93052 612 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 PHOX2BQ99453 314 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 TMEM121Q9BTD3 319 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 XPNPEP3Q9NQH7 507 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 RNF186Q9NXI6 227 aa11.19□□□□□ -0.62
CLIP1-210ENST00000538120 DNALI1O14645 258 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms