RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PDCD2Q16342 344 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 DENND1BQ6P3S1 775 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 DARS2Q6PI48 645 aaKnown RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 CDHR3Q6ZTQ4 885 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 ARCQ7LC44 396 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 ARID3BQ8IVW6 561 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 PHC3Q8NDX5 983 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 SPATA18Q8TC71 538 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 TFAP2BQ92481 460 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 NCSTNQ92542 709 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 FAF2Q96CS3 445 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 RTP4Q96DX8 246 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 OLFM3Q96PB7 478 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 POPDC2Q9HBU9 364 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 HBS1LQ9Y450 684 aaKnown RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 KRT38O76015 456 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 RNF8O76064 485 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 CD48P09326 243 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 PIM1P11309 404 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 AOC1P19801 751 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 PSMC4P43686 418 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 SERPINB9P50453 376 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 MYL6P60660 151 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 XIAPP98170 497 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 TRPC3Q13507 836 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 KCNT1Q5JUK3 1230 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 NUDCD3Q8IVD9 361 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 GPC2Q8N158 579 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 PPM1NQ8N819 430 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 SLC4A11Q8NBS3 891 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 TMEM143Q96AN5 459 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 DTNBP1Q96EV8 351 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 CFAP36Q96G28 342 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 ACAP3Q96P50 834 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 CENPKQ9BS16 269 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 VCX3BQ9H321 246 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 SLC7A8Q9UHI5 535 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 LRRC37A2A6NM11 1700 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 ADCY3O60266 1144 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 FAM189A1O60320 539 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 RFPL1O75677 317 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 AP1G2O75843 785 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 EDN1P05305 212 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 BPGMP07738 259 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 OSBPP22059 807 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 MIPP30301 263 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 CRHR1P34998 444 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 CDK7P50613 346 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 MRPS5P82675 430 aaKnown RBP12.61□□□□□ -0.39
CPSF7-218ENST00000537641 SP4Q02446 784 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 CDC16Q13042 620 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 CUL3Q13618 768 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 CHI3L2Q15782 390 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 ZNF699Q32M78 642 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 HSF5Q4G112 596 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-218ENST00000537641 STXBP5Q5T5C0 1151 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 C4orf22Q6V702 233 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 ACAD11Q709F0 780 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 CTAGE3PQ8IX95 158 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 KIAA0319LQ8IZA0 1049 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 JADE3Q92613 823 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 THTPAQ9BU02 230 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 NIFKQ9BYG3 293 aaKnown RBP12.61□□□□□ -0.39
CPSF7-218ENST00000537641 MTMR12Q9C0I1 747 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 SDCBP2Q9H190 292 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 FAM96AQ9H5X1 160 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 VCX3AQ9NNX9 186 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 DMAP1Q9NPF5 467 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-218ENST00000537641 ZNF302Q9NR11 478 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 SOX13Q9UN79 622 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 SSX2IPQ9Y2D8 614 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 TELO2Q9Y4R8 837 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 MAFBQ9Y5Q3 323 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-218ENST00000537641 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.61□□□□□ -0.39
CPSF7-218ENST00000537641 SBF1O95248 1867 aa12.61□□□□□ -0.39
CPSF7-218ENST00000537641 SDR42E2A6NKP2 422 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 BUD23O43709 281 aaKnown RBP12.6□□□□□ -0.39
CPSF7-218ENST00000537641 APOEP02649 317 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 UBTFL6P0CB48 400 aaPredicted RBP12.6□□□□□ -0.39
CPSF7-218ENST00000537641 HARSP12081 509 aaKnown RBP12.6□□□□□ -0.39
CPSF7-218ENST00000537641 CNTFP26441 200 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 ASPAP45381 313 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 RPS6KA3P51812 740 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 AQP5P55064 265 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 POLE2P56282 527 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 ZNF394Q53GI3 561 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 C1orf146Q5VVC0 180 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 TIFABQ6ZNK6 161 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 ST13P4Q8IZP2 240 aaPredicted RBP12.6□□□□□ -0.39
CPSF7-218ENST00000537641 TAB3Q8N5C8 712 aaPredicted RBP12.6□□□□□ -0.39
CPSF7-218ENST00000537641 MCUQ8NE86 351 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 SLC7A3Q8WY07 619 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 HSPH1Q92598 858 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 MCRS1Q96EZ8 462 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms