RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 HS1BP3Q53T59 392 aa25.39■■□□□ 1.66
HMGA2-208ENST00000537429 PRSS36Q5K4E3 855 aa25.39■■□□□ 1.66
HMGA2-208ENST00000537429 JOSD2Q8TAC2 188 aa25.39■■□□□ 1.66
HMGA2-208ENST00000537429 GOLGA1Q92805 767 aa25.39■■□□□ 1.66
HMGA2-208ENST00000537429 PYCARDQ9ULZ3 195 aa25.39■■□□□ 1.66
HMGA2-208ENST00000537429 OBSL1O75147 1896 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 A0A0U1RQJ8 604 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 A0A1W2PRU2 124 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 NRG2O14511 850 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-208ENST00000537429 MOSPD3O75425 235 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 ABL1P00519 1130 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 RFC1P35251 1148 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-208ENST00000537429 RNASE9P60153 205 aaKnown RBP25.38■■□□□ 1.65
HMGA2-208ENST00000537429 RPL7AP62424 266 aaKnown RBP25.38■■□□□ 1.65
HMGA2-208ENST00000537429 TCEAL1Q15170 157 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 SLC5A9Q2M3M2 681 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 BTBD8Q5XKL5 378 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 TXLNBQ8N3L3 684 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 ZNF276Q8N554 614 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 ATRIPQ8WXE1 791 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 RFFLQ8WZ73 363 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 SLC2A13Q96QE2 648 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 TRIM62Q9BVG3 475 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 UBE2ZQ9H832 354 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-208ENST00000537429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.38■■□□□ 1.65
HMGA2-208ENST00000537429 UVRAGQ9P2Y5 699 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 CDH22Q9UJ99 828 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 PPP2R2CQ9Y2T4 447 aa25.38■■□□□ 1.65
HMGA2-208ENST00000537429 H3BQ06 376 aaPredicted RBP25.37■■□□□ 1.65
HMGA2-208ENST00000537429 ZNF197O14709 1029 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 KCNA5P22460 613 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 FLT3P36888 993 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 ATAT1Q5SQI0 421 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 RHOT2Q8IXI1 618 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 DEFB106AQ8N104 65 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 EMC1Q8N766 993 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 SMRP1Q8NCR6 262 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 SHKBP1Q8TBC3 707 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 SLC35G2Q8TBE7 412 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 EDEM1Q92611 657 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 TCEAL4Q96EI5 215 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 MCEEQ96PE7 176 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 GCNAQ96QF7 691 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 NUP85Q9BW27 656 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 ATXN3LQ9H3M9 355 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 WDR6Q9NNW5 1121 aaKnown RBP25.37■■□□□ 1.65
HMGA2-208ENST00000537429 COG5Q9UP83 839 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 NAALADL1Q9UQQ1 740 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 DENND4CQ5VZ89 1909 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 ANAPC1Q9H1A4 1944 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 A0A0A6YYK5 440 aaPredicted RBP25.37■■□□□ 1.65
HMGA2-208ENST00000537429 TMEM191CA6NGB0 347 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 BTNL10A8MVZ5 291 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 DAB1O75553 588 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 RARGP13631 454 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 GJA1P17302 382 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 KIF5AQ12840 1032 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 TRNP1Q6NT89 227 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 DCUN1D2Q6PH85 259 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 ZNF662Q6ZS27 426 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 MAFAQ8NHW3 353 aaPredicted RBP25.37■■□□□ 1.65
HMGA2-208ENST00000537429 MRPS31Q92665 395 aaKnown RBP25.37■■□□□ 1.65
HMGA2-208ENST00000537429 OSGEPQ9NPF4 335 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 CTTNBP2NLQ9P2B4 639 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 CD207Q9UJ71 328 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 DUSP10Q9Y6W6 482 aa25.37■■□□□ 1.65
HMGA2-208ENST00000537429 SPTBN5Q9NRC6 3674 aaKnown RBP25.37■■□□□ 1.65
HMGA2-208ENST00000537429 C2CD4BA6NLJ0 364 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 CAPN9O14815 690 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 RALAP11233 206 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 NCAM1P13591 858 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 NOS2P35228 1153 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 MATKP42679 507 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 TUBP50607 506 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 CYP4F8P98187 520 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 SYPL2Q5VXT5 272 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 ZNF564Q8TBZ8 553 aaPredicted RBP25.36■■□□□ 1.65
HMGA2-208ENST00000537429 HLA-CQ95604 372 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 TRIM44Q96DX7 344 aaPredicted RBP25.36■■□□□ 1.65
HMGA2-208ENST00000537429 DDX23Q9BUQ8 820 aaKnown RBP25.36■■□□□ 1.65
HMGA2-208ENST00000537429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.36■■□□□ 1.65
HMGA2-208ENST00000537429 SALL4Q9UJQ4 1053 aa25.36■■□□□ 1.65
HMGA2-208ENST00000537429 MRPS23Q9Y3D9 190 aaKnown RBP25.36■■□□□ 1.65
HMGA2-208ENST00000537429 PRUNE2Q8WUY3 3088 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 TLR5O60602 858 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 MTA2O94776 668 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 OAS1P00973 400 aaKnown RBP25.35■■□□□ 1.65
HMGA2-208ENST00000537429 DCAF6Q58WW2 860 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 HECTD3Q5T447 861 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 RXFP2Q8WXD0 754 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 RIPOR3Q96MK2 946 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 TRIM7Q9C029 511 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 CCSER2Q9H7U1 834 aa25.35■■□□□ 1.65
HMGA2-208ENST00000537429 C2orf78A6NCI8 922 aa25.34■■□□□ 1.65
HMGA2-208ENST00000537429 HADHBP55084 474 aaKnown RBP25.34■■□□□ 1.65
HMGA2-208ENST00000537429 ITFG1Q8TB96 612 aa25.34■■□□□ 1.65
HMGA2-208ENST00000537429 FNIP1Q8TF40 1166 aa25.34■■□□□ 1.65
HMGA2-208ENST00000537429 RNF139Q8WU17 664 aa25.34■■□□□ 1.65
HMGA2-208ENST00000537429 NT5C3BQ969T7 300 aa25.34■■□□□ 1.65
HMGA2-208ENST00000537429 TRIM10Q9UDY6 481 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms