RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZDHHC4Q9NPG8 344 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 MYH10P35580 1976 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 LNP1A1A4G5 178 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 C4orf47A7E2U8 309 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 MAP3K13O43283 966 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ADAM23O75077 832 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 KCNK5O95279 499 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 NR2F2P24468 414 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ATP5C1P36542 298 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 P2RY2P41231 377 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 SYKP43405 635 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PGFP49763 221 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 KRT85P78386 507 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 INCA1Q0VD86 236 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 BYSLQ13895 437 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 NFIL3Q16649 462 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CLEC20AQ6ZU45 233 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 HTR3DQ70Z44 454 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 INTS8Q75QN2 995 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TRMT11Q7Z4G4 463 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 HMGB4Q8WW32 186 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 RLN3Q8WXF3 142 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CHAMP1Q96JM3 812 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 NT5C1AQ9BXI3 368 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.78■□□□□ 0.925e-7■■■■■ 206.2
TNFRSF1B-204ENST00000536782 ANGPTL2Q9UKU9 493 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 SCML2Q9UQR0 700 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CEP192Q8TEP8 1941 aa20.78■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TCRBV21S2A2A0A5A6 115 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 RHOBTB3O94955 611 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TBX18O95935 607 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 KRT13P13646 458 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PMLP29590 882 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 GCLMP48507 274 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 GOLGA8FQ08AF8 430 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 GOLGA8DPQ0D2H9 430 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 C10orf76Q5T2E6 689 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 DAB2IPQ5VWQ8 1189 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 LPCAT2Q7L5N7 544 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 GPRIN1Q7Z2K8 1008 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PGBD3Q8N328 593 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ZNF513Q8N8E2 541 aaPredicted RBP20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TERB1Q8NA31 727 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PIGKQ92643 395 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 JAKMIP2Q96AA8 810 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CYFIP2Q96F07 1278 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TWNKQ96RR1 684 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 KLF16Q9BXK1 252 aaPredicted RBP20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CYP3A43Q9HB55 503 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CYLDQ9NQC7 956 aa20.77■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PCNX2A6NKB5 2137 aa20.77■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PATE3B3GLJ2 98 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 HHLA1C9JL84 531 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CYP26A1O43174 497 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 GREM1O60565 184 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PRR29P0C7W0 189 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ACO1P21399 889 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NDUFA8P51970 172 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CCDC150Q8NCX0 1101 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TAS1R2Q8TE23 839 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 XPO6Q96QU8 1125 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 DNAI2Q9GZS0 605 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 APOBEC3GQ9HC16 384 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PNPLA8Q9NP80 782 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 LSM7Q9UK45 103 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MAPK8IP1Q9UQF2 711 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PCDHA5Q9Y5H7 936 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 IGF2RP11717 2491 aa20.76■□□□□ 0.91
TNFRSF1B-204ENST00000536782 FAM237AA0A1B0GTK4 181 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TRIM49P0CI25 452 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TRIM49CP0CI26 452 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 RPL13P26373 211 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PSMC2P35998 433 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ENPEPQ07075 957 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PPP3CAQ08209 521 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 DPYDQ12882 1025 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ST3GAL2Q16842 350 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 GRAMD4Q6IC98 578 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PSAPL1Q6NUJ1 521 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 FAM186BQ8IYM0 893 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 FRMD1Q8N878 549 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 BBS2Q9BXC9 721 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NIF3L1Q9GZT8 377 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MMRN2Q9H8L6 949 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TMEM9BQ9NQ34 198 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 DNAJC17Q9NVM6 304 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 OSER1Q9NX31 292 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 WDR35Q9P2L0 1181 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ZZEF1O43149 2961 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CACNA1EQ15878 2313 aa20.75■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NEDD8-MDP1E9PL57 170 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TRIM24O15164 1050 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CILPO75339 1184 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CD58P19256 250 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NOVA1P51513 510 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 IRX4P78413 519 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 SHC2P98077 582 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ADAM9Q13443 819 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MAP7D1Q3KQU3 841 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms