RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PATL1Q86TB9 770 aaKnown RBP14.52□□□□□ -0.08
LIG1-203ENST00000536218 LRRC43Q8N309 656 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 MTMR12Q9C0I1 747 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 RNPEPQ9H4A4 650 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 TIMMDC1Q9NPL8 285 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 ANAPC7Q9UJX3 599 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 C15orf38-AP3S2A0A0A6YYH1 394 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 LDHAP00338 332 aaKnown RBP14.52□□□□□ -0.09
LIG1-203ENST00000536218 RRM1P23921 792 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 RPL5P46777 297 aaKnown RBP14.52□□□□□ -0.09
LIG1-203ENST00000536218 NOP14P78316 857 aaKnown RBP14.52□□□□□ -0.09
LIG1-203ENST00000536218 GRAMD1BQ3KR37 738 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 SGO2Q562F6 1265 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 ARPINQ7Z6K5 226 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 TRABD2AQ86V40 505 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 ZFP28Q8NHY6 868 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 PIP4K2CQ8TBX8 421 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 OSBPL8Q9BZF1 889 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 LGALS13Q9UHV8 139 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 STYXL1Q9Y6J8 313 aa14.52□□□□□ -0.09
LIG1-203ENST00000536218 ARHGAP42A6NI28 874 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 COL6A2P12110 1019 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 ATF2P15336 505 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 NR1H3Q13133 447 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 CUL2Q13617 745 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 PDE1CQ14123 709 aaPredicted RBP14.51□□□□□ -0.09
LIG1-203ENST00000536218 HSP90AA5PQ58FG0 334 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 IER5Q5VY09 327 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 EFCAB12Q6NXP0 572 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 SCARA5Q6ZMJ2 495 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 USP50Q70EL3 339 aaPredicted RBP14.51□□□□□ -0.09
LIG1-203ENST00000536218 PDSS2Q86YH6 399 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 ZBTB8OSQ8IWT0 167 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 PPP1R13LQ8WUF5 828 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 RSPH1Q8WYR4 309 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 PRICKLE1Q96MT3 831 aaPredicted RBP14.51□□□□□ -0.09
LIG1-203ENST00000536218 ZSWIM1Q9BR11 485 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 C11orf70Q9BRQ4 267 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 TMEM120AQ9BXJ8 343 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 MRPL4Q9BYD3 311 aaKnown RBP14.51□□□□□ -0.09
LIG1-203ENST00000536218 MCM3APO60318 1980 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 MSCO60682 206 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 RARBP10826 455 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 ADRA1DP25100 572 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 GJC1P36383 396 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 ITGA7Q13683 1181 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 CLEC16AQ2KHT3 1053 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 ZNF568Q3ZCX4 644 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 PAOXQ6QHF9 649 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 SLC13A5Q86YT5 568 aaPredicted RBP14.51□□□□□ -0.09
LIG1-203ENST00000536218 SLC26A7Q8TE54 656 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 DENND1AQ8TEH3 1009 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 GIPC3Q8TF64 312 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 SNF8Q96H20 258 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 SMYD3Q9H7B4 428 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 GTF3C4Q9UKN8 822 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 PCDHB2Q9Y5E7 798 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 ATP8B3O60423 1300 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 SBF1O95248 1867 aa14.51□□□□□ -0.09
LIG1-203ENST00000536218 MYOCOSA0A1B0GUC4 107 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 A0A1W2PPM1 405 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ZBTB42B2RXF5 422 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 NDC80O14777 642 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 SPTLC1O15269 473 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 TFPTP0C1Z6 253 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 MAPK4P31152 587 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 SNAPC2Q13487 334 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 LPIN1Q14693 890 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 STAT4Q14765 748 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 TRIP10Q15642 601 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 GPR162Q16538 588 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ZBED8Q8IZ13 594 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 DQX1Q8TE96 717 aaKnown RBP14.5□□□□□ -0.09
LIG1-203ENST00000536218 MAML1Q92585 1016 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 FAM167AQ96KS9 214 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 GCNAQ96QF7 691 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 CGRRF1Q99675 332 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 FAM118BQ9BPY3 351 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 FAIMQ9NVQ4 179 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 CNTNAP2Q9UHC6 1331 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 PTPRFP10586 1907 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 GOLGA8RI6L899 631 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 FCHO1O14526 889 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 TP73O15350 636 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 TOM1L1O75674 476 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ITIH2P19823 946 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 PEX2P28328 305 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 GNA15P30679 374 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 NSFP46459 744 aaKnown RBP14.5□□□□□ -0.09
LIG1-203ENST00000536218 RXRGP48443 463 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 MYL6P60660 151 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 C16orf72Q14CZ0 275 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ARMCX2Q7L311 632 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ENOSF1Q7L5Y1 443 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 SAPCD2Q86UD0 394 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 RBM15BQ8NDT2 890 aaKnown RBP14.5□□□□□ -0.09
LIG1-203ENST00000536218 RIN3Q8TB24 985 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 MAML3Q96JK9 1138 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 MRPL1Q9BYD6 325 aaKnown RBP14.5□□□□□ -0.09
LIG1-203ENST00000536218 IMPG2Q9BZV3 1241 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms