RNA–Protein interactions for RNA: ENST00000536072.6

EDC4-202, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-202ENST00000536072 DUSP16Q9BY84 665 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 SENP6Q9GZR1 1112 aaPredicted RBP17.25■□□□□ 0.35
EDC4-202ENST00000536072 DNAI2Q9GZS0 605 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 UBN1Q9NPG3 1134 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 CYLDQ9NQC7 956 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.25■□□□□ 0.35
EDC4-202ENST00000536072 CLUHO75153 1309 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 KCNN4O15554 427 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 TGM2P21980 687 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 CYP2F1P24903 491 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 L1CAMP32004 1257 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 RDXP35241 583 aaKnown RBP17.25■□□□□ 0.35
EDC4-202ENST00000536072 RABGGTBP53611 331 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 FCGRTP55899 365 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 MDH1BQ5I0G3 518 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 LRRC34Q8IZ02 419 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 PYROXD1Q8WU10 500 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 MAML1Q92585 1016 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 FAM149B1Q96BN6 582 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 SENP8Q96LD8 212 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 ZNF670Q9BS34 389 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 AGO3Q9H9G7 860 aaKnown RBP17.25■□□□□ 0.35
EDC4-202ENST00000536072 SPC25Q9HBM1 224 aa17.25■□□□□ 0.35
EDC4-202ENST00000536072 TIMM13Q9Y5L4 95 aaPredicted RBP17.25■□□□□ 0.35
EDC4-202ENST00000536072 CA12O43570 354 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 RBL1P28749 1068 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 SSTR1P30872 391 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 SCNN1AP37088 669 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 NDUFV1P49821 464 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 CLCNKBP51801 687 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 SF3A3Q12874 501 aaKnown RBP eCLIP17.24■□□□□ 0.355e-7■■■■□ 24.7
EDC4-202ENST00000536072 IFT88Q13099 833 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 BBS9Q3SYG4 887 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 SERINC5Q86VE9 423 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 DEFB106AQ8N104 65 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 CCDC33Q8N5R6 958 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 DYDC1Q8WWB3 177 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 FAF2Q96CS3 445 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 NCAPGQ9BPX3 1015 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 MED10Q9BTT4 135 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 NRDE2Q9H7Z3 1164 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 AP4E1Q9UPM8 1137 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 SCN10AQ9Y5Y9 1956 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 RASA4BC9J798 803 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 GABRDO14764 452 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 RASA4O43374 803 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 THP07101 528 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 NPR3P17342 541 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 DPYSL2Q16555 572 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 MICALCLQ6ZW33 695 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 ARCQ7LC44 396 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 TADA2BQ86TJ2 420 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 SPATS2Q86XZ4 545 aaKnown RBP17.24■□□□□ 0.35
EDC4-202ENST00000536072 FBXO36Q8NEA4 188 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 KCTD15Q96SI1 283 aaPredicted RBP17.24■□□□□ 0.35
EDC4-202ENST00000536072 UPF3AQ9H1J1 476 aaKnown RBP17.24■□□□□ 0.35
EDC4-202ENST00000536072 CCDC134Q9H6E4 229 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 MTMR10Q9NXD2 777 aa17.24■□□□□ 0.35
EDC4-202ENST00000536072 DDX43Q9NXZ2 648 aaKnown RBP17.24■□□□□ 0.35
EDC4-202ENST00000536072 ARL5CA6NH57 179 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 PIAS1O75925 651 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 SCNN1GP51170 649 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 PITX1P78337 314 aaPredicted RBP17.23■□□□□ 0.35
EDC4-202ENST00000536072 PRKCZQ05513 592 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 EFHC1Q5JVL4 640 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 FAM131BQ86XD5 332 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 PYROXD2Q8N2H3 581 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 RIBC1Q8N443 379 aaPredicted RBP17.23■□□□□ 0.35
EDC4-202ENST00000536072 C3orf58Q8NDZ4 430 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 CRTAC1Q9NQ79 661 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 SLC38A7Q9NVC3 462 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 ZMYND8Q9ULU4 1186 aaPredicted RBP17.23■□□□□ 0.35
EDC4-202ENST00000536072 ABT1Q9ULW3 272 aaKnown RBP17.23■□□□□ 0.35
EDC4-202ENST00000536072 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 E7ESA3 106 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 SEPT4O43236 478 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 ZBED1O96006 694 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 VIMP08670 466 aaKnown RBP17.23■□□□□ 0.35
EDC4-202ENST00000536072 THPOP40225 353 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 MATKP42679 507 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 SULT1E1P49888 294 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 MAP3K7CLP57077 242 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 SLC8A3P57103 927 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 GBE1Q04446 702 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 RNASELQ05823 741 aaKnown RBP17.23■□□□□ 0.35
EDC4-202ENST00000536072 MGAT3Q09327 533 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 EFTUD2Q15029 972 aaKnown RBP eCLIP17.23■□□□□ 0.351e-7■■■■■ 30.9
EDC4-202ENST00000536072 DCAF6Q58WW2 860 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 GKAP1Q5VSY0 366 aaPredicted RBP17.23■□□□□ 0.35
EDC4-202ENST00000536072 AGMOQ6ZNB7 445 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 CLEC20AQ6ZU45 233 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 PDIK1LQ8N165 341 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 GDAP1Q8TB36 358 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 PAAF1Q9BRP4 392 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 RAB6BQ9NRW1 208 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 BRCA2P51587 3418 aa17.23■□□□□ 0.35
EDC4-202ENST00000536072 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
EDC4-202ENST00000536072 CASTOR2A6NHX0 329 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms