RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MYH10P35580 1976 aa13.85□□□□□ -0.19
RTN3-207ENST00000536011 SPTBN2O15020 2390 aa13.85□□□□□ -0.19
RTN3-207ENST00000536011 A0A0A0MRY4 1105 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 TBC1D3BA6NDS4 549 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 CILPO75339 1184 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 BEST1O76090 585 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 SMC2O95347 1197 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 KLF8O95600 359 aaPredicted RBP13.84□□□□□ -0.19
RTN3-207ENST00000536011 IRF1P10914 325 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 ACO1P21399 889 aaKnown RBP13.84□□□□□ -0.19
RTN3-207ENST00000536011 TIE1P35590 1138 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 SLC6A11P48066 632 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 CREB5Q02930 508 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 SF3A2Q15428 464 aaKnown RBP13.84□□□□□ -0.19
RTN3-207ENST00000536011 ANO4Q32M45 955 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 ZCWPW2Q504Y3 356 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 PPM1JQ5JR12 505 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 TTC30AQ86WT1 665 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 BBS7Q8IWZ6 715 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 CCDC33Q8N5R6 958 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 ALLCQ8N6M5 410 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 TXNDC5Q8NBS9 432 aaKnown RBP13.84□□□□□ -0.19
RTN3-207ENST00000536011 FBXL13Q8NEE6 735 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 JAKMIP2Q96AA8 810 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 CHAMP1Q96JM3 812 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 XPO6Q96QU8 1125 aaKnown RBP13.84□□□□□ -0.19
RTN3-207ENST00000536011 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 APOBEC3GQ9HC16 384 aaKnown RBP13.84□□□□□ -0.19
RTN3-207ENST00000536011 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
RTN3-207ENST00000536011 WDR35Q9P2L0 1181 aa13.84□□□□□ -0.19
RTN3-207ENST00000536011 EML5Q05BV3 1969 aa13.83□□□□□ -0.19
RTN3-207ENST00000536011 SLC16A3O15427 465 aaKnown RBP13.83□□□□□ -0.2
RTN3-207ENST00000536011 ZBTB24O43167 697 aaPredicted RBP13.83□□□□□ -0.2
RTN3-207ENST00000536011 CYP26A1O43174 497 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 GDF9O60383 454 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 TULP3O75386 442 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 RALAP11233 206 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 CCDC6Q16204 474 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 C10orf120Q5SQS8 335 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 PMS2CLQ68D20 193 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 CCDC186Q7Z3E2 898 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 C12orf40Q86WS4 652 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 ETFBKMTQ8IXQ9 262 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 ARHGAP18Q8N392 663 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 TERB1Q8NA31 727 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 IL17RCQ8NAC3 791 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 MDGA1Q8NFP4 955 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 GSDMAQ96QA5 445 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 TWNKQ96RR1 684 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 DUSP16Q9BY84 665 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 TPSD1Q9BZJ3 242 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 RAB20Q9NX57 234 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 DNMT3LQ9UJW3 386 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 NAGPAQ9UK23 515 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 SDK1Q7Z5N4 2213 aa13.83□□□□□ -0.2
RTN3-207ENST00000536011 BCLAF3A2AJT9 711 aaKnown RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 DCLK1O15075 740 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 CAVIN2O95810 425 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 RARGP13631 454 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 DPP6P42658 865 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 KIR2DL1P43626 348 aaPredicted RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 PLA2G4AP47712 749 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 KIF11P52732 1056 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 MCCD1P59942 119 aaPredicted RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 YWHAEP62258 255 aaKnown RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 COBLL1Q53SF7 1204 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 C10orf76Q5T2E6 689 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 STPG1Q5TH74 334 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 SDE2Q6IQ49 451 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 GPRIN1Q7Z2K8 1008 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 CYP2U1Q7Z449 544 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 PHTF2Q8N3S3 785 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 ZNF276Q8N554 614 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 ZNF513Q8N8E2 541 aaPredicted RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 NAT16Q8N8M0 369 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 HEXIM2Q96MH2 286 aaKnown RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 KLF16Q9BXK1 252 aaPredicted RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 GDPD2Q9HCC8 539 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 CISHQ9NSE2 258 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
RTN3-207ENST00000536011 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 MARK1Q9P0L2 795 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
RTN3-207ENST00000536011 ZNF510Q9Y2H8 683 aa13.82□□□□□ -0.2
RTN3-207ENST00000536011 A0A1W2PQH9 124 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 HHLA1C9JL84 531 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 NEDD8-MDP1E9PL57 170 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 SGK1O00141 431 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 MAP3K13O43283 966 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 CACNG3O60359 315 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 ADRB1P08588 477 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 NUCB2P80303 420 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 FKBP3Q00688 224 aaKnown RBP13.81□□□□□ -0.2
RTN3-207ENST00000536011 LRRC63Q05C16 580 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 PNOCQ13519 176 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 STIM1Q13586 685 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms