RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 TRIM24O15164 1050 aa21.76■■□□□ 1.07
LTBR-205ENST00000535739 CALUO43852 315 aaPredicted RBP21.76■■□□□ 1.07
LTBR-205ENST00000535739 PSAPL1Q6NUJ1 521 aa21.76■■□□□ 1.07
LTBR-205ENST00000535739 PIGKQ92643 395 aa21.76■■□□□ 1.07
LTBR-205ENST00000535739 JAKMIP2Q96AA8 810 aa21.76■■□□□ 1.07
LTBR-205ENST00000535739 DUSP9Q99956 384 aaKnown RBP21.76■■□□□ 1.07
LTBR-205ENST00000535739 KLF16Q9BXK1 252 aaPredicted RBP21.76■■□□□ 1.07
LTBR-205ENST00000535739 DEC1Q9P2X7 70 aa21.76■■□□□ 1.07
LTBR-205ENST00000535739 ANGPTL2Q9UKU9 493 aa21.76■■□□□ 1.07
LTBR-205ENST00000535739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 TCRBV21S2A2A0A5A6 115 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 MYL1P05976 194 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 PRR29P0C7W0 189 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 FAM200BP0CF97 657 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 VAMP7P51809 220 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 ST3GAL2Q16842 350 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 CLEC20AQ6ZU45 233 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 TMEFF1Q8IYR6 380 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 PGBD3Q8N328 593 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 ZNF513Q8N8E2 541 aaPredicted RBP21.75■■□□□ 1.07
LTBR-205ENST00000535739 TERB1Q8NA31 727 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 SPACA7Q96KW9 195 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 APOBEC3GQ9HC16 384 aaKnown RBP21.75■■□□□ 1.07
LTBR-205ENST00000535739 OSER1Q9NX31 292 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 MBD1Q9UIS9 605 aaPredicted RBP21.75■■□□□ 1.07
LTBR-205ENST00000535739 HCN2Q9UL51 889 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 TRAF3IP3Q9Y228 551 aa21.75■■□□□ 1.07
LTBR-205ENST00000535739 HHLA1C9JL84 531 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 CYP26A1O43174 497 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 MAP3K13O43283 966 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 GREM1O60565 184 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 TRIM49P0CI25 452 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 TRIM49CP0CI26 452 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 GCLMP48507 274 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 IRX4P78413 519 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 INCA1Q0VD86 236 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 C10orf76Q5T2E6 689 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 HTR3DQ70Z44 454 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 ARMCX6Q7L4S7 300 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 LPCAT2Q7L5N7 544 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 TAS1R2Q8TE23 839 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 CYFIP2Q96F07 1278 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 SPATA32Q96LK8 384 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 IPO9Q96P70 1041 aaKnown RBP21.74■■□□□ 1.07
LTBR-205ENST00000535739 HNRNPABQ99729 332 aaKnown RBP21.74■■□□□ 1.07
LTBR-205ENST00000535739 MAPK8IP1Q9UQF2 711 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 SCML2Q9UQR0 700 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 CFAP47Q6ZTR5 3102 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 ADAMTS9Q9P2N4 1935 aa21.74■■□□□ 1.07
LTBR-205ENST00000535739 GIPC1O14908 333 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 ACO1P21399 889 aaKnown RBP21.73■■□□□ 1.07
LTBR-205ENST00000535739 NR2F2P24468 414 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 ATP5C1P36542 298 aaKnown RBP21.73■■□□□ 1.07
LTBR-205ENST00000535739 WASP42768 502 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 PTGER3P43115 390 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 SYKP43405 635 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 NOVA1P51513 510 aaKnown RBP21.73■■□□□ 1.07
LTBR-205ENST00000535739 NDUFA8P51970 172 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 PPP3CAQ08209 521 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 MAP7D1Q3KQU3 841 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 PREPLQ4J6C6 727 aaPredicted RBP21.73■■□□□ 1.07
LTBR-205ENST00000535739 DAB2IPQ5VWQ8 1189 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 MIB1Q86YT6 1006 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 MMRN2Q9H8L6 949 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 NMUR1Q9HB89 426 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 TMEM9BQ9NQ34 198 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 CYLDQ9NQC7 956 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 NUDT5Q9UKK9 219 aa21.73■■□□□ 1.07
LTBR-205ENST00000535739 A0A1W2PQH9 124 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 NEDD8-MDP1E9PL57 170 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 CDX4O14627 284 aaPredicted RBP21.72■■□□□ 1.07
LTBR-205ENST00000535739 MDM4O15151 490 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 MAPK13O15264 365 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 RHOBTB3O94955 611 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 CD58P19256 250 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 GRAMD4Q6IC98 578 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 TPGS1Q6ZTW0 290 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 NUDT18Q6ZVK8 323 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 TRMT11Q7Z4G4 463 aaKnown RBP21.72■■□□□ 1.07
LTBR-205ENST00000535739 KCNV2Q8TDN2 545 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 NT5C1AQ9BXI3 368 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 IMPG2Q9BZV3 1241 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 CYP3A43Q9HB55 503 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 DNAJC17Q9NVM6 304 aaKnown RBP21.72■■□□□ 1.07
LTBR-205ENST00000535739 ZDHHC9Q9Y397 364 aa21.72■■□□□ 1.07
LTBR-205ENST00000535739 PCNX2A6NKB5 2137 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 KIF20AO95235 890 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 TYRP14679 529 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 TRIM21P19474 475 aaKnown RBP21.71■■□□□ 1.07
LTBR-205ENST00000535739 SHC2P98077 582 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 DPYDQ12882 1025 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 NFIL3Q16649 462 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 EGFLAMQ63HQ2 1017 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 INTS8Q75QN2 995 aaKnown RBP21.71■■□□□ 1.07
LTBR-205ENST00000535739 FAM186BQ8IYM0 893 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 CCDC47Q96A33 483 aaKnown RBP21.71■■□□□ 1.07
LTBR-205ENST00000535739 BBS2Q9BXC9 721 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 NIF3L1Q9GZT8 377 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 TMEM74BQ9NUR3 256 aa21.71■■□□□ 1.07
LTBR-205ENST00000535739 LSM7Q9UK45 103 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms