RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CYFIP2Q96F07 1278 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 TWNKQ96RR1 684 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 UBXN6Q9BZV1 441 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 CYLDQ9NQC7 956 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 RAB20Q9NX57 234 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 DLL3Q9NYJ7 618 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 CHORDC1Q9UHD1 332 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-202ENST00000535685 GMEB2Q9UKD1 530 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 RAB23Q9ULC3 237 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 THADAQ6YHU6 1953 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 PRR5-ARHGAP8B1AHC4 643 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 CYP17A1P05093 508 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 SDHBP21912 280 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 MAP3K7CLP57077 242 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 ARHGAP8P85298 464 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 DMWDQ09019 674 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 SIM2Q14190 667 aaPredicted RBP11.4□□□□□ -0.58
CCDC60-202ENST00000535685 HSF5Q4G112 596 aaPredicted RBP11.4□□□□□ -0.58
CCDC60-202ENST00000535685 ANKRD40Q6AI12 368 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 RHBDF2Q6PJF5 856 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 KIAA2013Q8IYS2 634 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 SEMA4DQ92854 862 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 SMARCE1Q969G3 411 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 DHTKD1Q96HY7 919 aaPredicted RBP11.4□□□□□ -0.58
CCDC60-202ENST00000535685 LOXL4Q96JB6 756 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 TSG101Q99816 390 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 HINFPQ9BQA5 517 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 DUSP16Q9BY84 665 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 TLR8Q9NR97 1041 aaKnown RBP11.4□□□□□ -0.58
CCDC60-202ENST00000535685 FAM49BQ9NUQ9 324 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 GMIPQ9P107 970 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 CFAP97Q9P2B7 532 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 EBF1Q9UH73 591 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 SLC8A2Q9UPR5 921 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 USP3Q9Y6I4 520 aa11.4□□□□□ -0.58
CCDC60-202ENST00000535685 NCOR2Q9Y618 2525 aa11.4□□□□□ -0.59
CCDC60-202ENST00000535685 K7EQS6 105 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 HOXC11O43248 304 aaPredicted RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 FOXD2O60548 495 aaPredicted RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 CLSTN1O94985 981 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 ADH1CP00326 375 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 ABL1P00519 1130 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 ABL2P42684 1182 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 KIF11P52732 1056 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 PMS1P54277 932 aaKnown RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 MRPS21P82921 87 aaKnown RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 LMNB2Q03252 620 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 IFRD2Q12894 506 aaPredicted RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 PUM1Q14671 1186 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 ARHGAP17Q68EM7 881 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 HTR3DQ70Z44 454 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 CCDC186Q7Z3E2 898 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 USP33Q8TEY7 942 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 GAB3Q8WWW8 586 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 RMDN1Q96DB5 314 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 ZC3H10Q96K80 434 aaKnown RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 CEP63Q96MT8 703 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 KLF16Q9BXK1 252 aaPredicted RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 CCSER2Q9H7U1 834 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 METTL14Q9HCE5 456 aaKnown RBP11.39□□□□□ -0.59
CCDC60-202ENST00000535685 SMPD4Q9NXE4 827 aa11.39□□□□□ -0.59
CCDC60-202ENST00000535685 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.38□□□□□ -0.59
CCDC60-202ENST00000535685 PSMA7O14818 248 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 GREM1O60565 184 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 TLR5O60602 858 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 ADORA2BP29275 332 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 TNFRSF4P43489 277 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 PGFP49763 221 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 RAD23BP54727 409 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 GAD2Q05329 585 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 ORC1Q13415 861 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 STIM1Q13586 685 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 PREPLQ4J6C6 727 aaPredicted RBP11.38□□□□□ -0.59
CCDC60-202ENST00000535685 CBWD6Q4V339 395 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 CBWD3Q5JTY5 395 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 CBWD5Q5RIA9 395 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 PPP1R26Q5T8A7 1209 aaPredicted RBP11.38□□□□□ -0.59
CCDC60-202ENST00000535685 GPRIN1Q7Z2K8 1008 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 ETFBKMTQ8IXQ9 262 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 PHTF2Q8N3S3 785 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 SLC4A11Q8NBS3 891 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 RPLP0P6Q8NHW5 317 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 TSC1Q92574 1164 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 SLC35C1Q96A29 364 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 TMEM176AQ96HP8 235 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 PNKPQ96T60 521 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 PARD6AQ9NPB6 346 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 CISHQ9NSE2 258 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 CLIC5Q9NZA1 410 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 ARMCX3Q9UH62 379 aaPredicted RBP11.38□□□□□ -0.59
CCDC60-202ENST00000535685 CEP192Q8TEP8 1941 aa11.38□□□□□ -0.59
CCDC60-202ENST00000535685 AXIN1O15169 862 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 P4HA2O15460 535 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 APBB3O95704 486 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 ADH5P11766 374 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 CD58P19256 250 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 ACO1P21399 889 aaKnown RBP11.37□□□□□ -0.59
CCDC60-202ENST00000535685 ATP5C1P36542 298 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms