RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 KRT3P12035 628 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 GJA1P17302 382 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 RNASE9P60153 205 aaKnown RBP16.32■□□□□ 0.2
CNN1-202ENST00000535659 MAMLD1Q13495 774 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 BEND5Q7L4P6 421 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 ITFG1Q8TB96 612 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 CTNNBL1Q8WYA6 563 aaPredicted RBP16.32■□□□□ 0.2
CNN1-202ENST00000535659 NECTIN4Q96NY8 510 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 TRIM62Q9BVG3 475 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 SELENOOQ9BVL4 669 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 KCNF1Q9H3M0 494 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 POPDC2Q9HBU9 364 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 MYO1AQ9UBC5 1043 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 TMEM59LQ9UK28 342 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 REXO2Q9Y3B8 237 aaKnown RBP16.32■□□□□ 0.2
CNN1-202ENST00000535659 GREB1Q4ZG55 1949 aa16.32■□□□□ 0.2
CNN1-202ENST00000535659 NRG2O14511 850 aaPredicted RBP16.31■□□□□ 0.2
CNN1-202ENST00000535659 HSF2BPO75031 334 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 GRAP2O75791 330 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 FYNP06241 537 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 RARGP13631 454 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 CYP4F8P98187 520 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 TEAD2Q15562 447 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 ARHGAP15Q53QZ3 475 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 HECTD3Q5T447 861 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 TXNDC8Q6A555 127 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 DNAJC24Q6P3W2 148 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 ARCQ7LC44 396 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 ACRBPQ8NEB7 543 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 SUSD6Q92537 303 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 EDEM1Q92611 657 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
CNN1-202ENST00000535659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNN1-202ENST00000535659 USP15Q9Y4E8 981 aaPredicted RBP16.31■□□□□ 0.2
CNN1-202ENST00000535659 CLUHO75153 1309 aa16.31■□□□□ 0.2
CNN1-202ENST00000535659 GRXCR2A6NFK2 248 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 CAPN9O14815 690 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 NCAM1P13591 858 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 DDX6P26196 483 aaKnown RBP eCLIP16.3■□□□□ 0.2
CNN1-202ENST00000535659 TUBP50607 506 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 LEXMQ3ZCV2 418 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 PPP1R15BQ5SWA1 713 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 DEFB106AQ8N104 65 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 ARHGEF26Q96DR7 871 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 SLC2A13Q96QE2 648 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 CDK5RAP1Q96SZ6 601 aaKnown RBP16.3■□□□□ 0.2
CNN1-202ENST00000535659 DESI2Q9BSY9 194 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 SLC46A2Q9BY10 475 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 TASP1Q9H6P5 420 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 CCSER2Q9H7U1 834 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 METTL5Q9NRN9 209 aaKnown RBP16.3■□□□□ 0.2
CNN1-202ENST00000535659 ZMYM5Q9UJ78 669 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 NAALADL1Q9UQQ1 740 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 SCINQ9Y6U3 715 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
CNN1-202ENST00000535659 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 ATMINO43313 823 aaPredicted RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 MBTPS2O43462 519 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 TLR5O60602 858 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 GJB6O95452 261 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 TBX18O95935 607 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 PFKLP17858 780 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 HDCP19113 662 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 NOS2P35228 1153 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 RFC1P35251 1148 aaPredicted RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 ATP5C1P36542 298 aaKnown RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 SMAD4Q13485 552 aaKnown RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 CBX2Q14781 532 aaPredicted RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 DCAF6Q58WW2 860 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 GPR158Q5T848 1215 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 SYPL2Q5VXT5 272 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 DCUN1D2Q6PH85 259 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 RSRC2Q7L4I2 434 aaKnown RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 TADA2BQ86TJ2 420 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 MAB21L3Q8N8X9 362 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 JOSD2Q8TAC2 188 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 RNF139Q8WU17 664 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 CYP2S1Q96SQ9 504 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 RNF38Q9H0F5 515 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.29■□□□□ 0.2
CNN1-202ENST00000535659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.29■□□□□ 0.2
CNN1-202ENST00000535659 NUDT5Q9UKK9 219 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 TMEM191CA6NGB0 347 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 DAB1O75553 588 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 OAS1P00973 400 aaKnown RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 CEBPBP17676 345 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 MATKP42679 507 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 VAV2P52735 878 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 RPL7AP62424 266 aaKnown RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 C10orf120Q5SQS8 335 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 STXBP5Q5T5C0 1151 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 KLHDC10Q6PID8 442 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 KIAA1328Q86T90 577 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 TXLNBQ8N3L3 684 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 EMC1Q8N766 993 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 ARL14EPQ8N8R7 260 aaPredicted RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 ING5Q8WYH8 240 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms