RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 MYOFQ9NZM1 2061 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 A0A0A0MRY4 1105 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 DCDC2BA2VCK2 349 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 TBC1D3BA6NDS4 549 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 SLC30A4O14863 429 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 HOXC11O43248 304 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 KLF8O95600 359 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 GBP1P32455 592 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 TIE1P35590 1138 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 PPP1R26Q5T8A7 1209 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 HTR3DQ70Z44 454 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 C11orf74Q86VG3 221 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 SFTPA1Q8IWL2 248 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 ALLCQ8N6M5 410 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 NAT16Q8N8M0 369 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 TXNDC5Q8NBS9 432 aaKnown RBP17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 CNOT6LQ96LI5 555 aaKnown RBP17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 FAM124BQ9H5Z6 455 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 CISHQ9NSE2 258 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 DEC1Q9P2X7 70 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 DNMT3LQ9UJW3 386 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 NAGPAQ9UK23 515 aa17.06■□□□□ 0.32
CLSTN3-204ENST00000535313 A0A1W2PQH9 124 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 ANTXRLA6NF34 631 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 DCLK1O15075 740 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 TULP3O75386 442 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 ZNF806P0C7X5 589 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 RARGP13631 454 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 PSEN1P49768 467 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 KIF11P52732 1056 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 SLC8A3P57103 927 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 MESP2Q0VG99 397 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 STIM1Q13586 685 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 CCDC6Q16204 474 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 EOGTQ5NDL2 527 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 C10orf120Q5SQS8 335 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 KLHDC10Q6PID8 442 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 TMEM25Q86YD3 366 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 ETFBKMTQ8IXQ9 262 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 IL17RCQ8NAC3 791 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 ENGASEQ8NFI3 743 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 WBP2Q969T9 261 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 TMEM176AQ96HP8 235 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 TIGD1Q96MW7 591 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 CDK5RAP1Q96SZ6 601 aaKnown RBP17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 TPSD1Q9BZJ3 242 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 DUSP15Q9H1R2 295 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 POLMQ9NP87 494 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 OSER1Q9NX31 292 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 KIAA1549LQ6ZVL6 1849 aa17.05■□□□□ 0.32
CLSTN3-204ENST00000535313 GDF9O60383 454 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 RALAP11233 206 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 MPLP40238 635 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 KIR2DL1P43626 348 aaPredicted RBP17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 PLA2G4AP47712 749 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 LRRC63Q05C16 580 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 SF3A2Q15428 464 aaKnown RBP17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 EMC10Q5UCC4 262 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 CCDC186Q7Z3E2 898 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 TRMT11Q7Z4G4 463 aaKnown RBP17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 MDGA1Q8NFP4 955 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 SPATA20Q8TB22 786 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 KCNV2Q8TDN2 545 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 ERCC4Q92889 916 aaPredicted RBP17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 TATDN2Q93075 761 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 XPO6Q96QU8 1125 aaKnown RBP17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 NMUR1Q9HB89 426 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 VPS45Q9NRW7 570 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 WDR35Q9P2L0 1181 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 ARMCX3Q9UH62 379 aaPredicted RBP17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 INVSQ9Y283 1065 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 EML5Q05BV3 1969 aa17.04■□□□□ 0.32
CLSTN3-204ENST00000535313 NEDD8-MDP1E9PL57 170 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 SGK1O00141 431 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 PSMA7O14818 248 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 MDM4O15151 490 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 GREM1O60565 184 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 RAD23BP54727 409 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 CREB5Q02930 508 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 CBWD6Q4V339 395 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 CBWD3Q5JTY5 395 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 PLA2G2CQ5R387 149 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 CBWD5Q5RIA9 395 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 C10orf76Q5T2E6 689 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 ARHGAP17Q68EM7 881 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 IL31Q6EBC2 164 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 TMEM92Q6UXU6 159 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 ZC3H3Q8IXZ2 948 aaKnown RBP17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 PHTF2Q8N3S3 785 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 TERB1Q8NA31 727 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 ARID3AQ99856 593 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 BBS2Q9BXC9 721 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 UBXN6Q9BZV1 441 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms