RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TAP1Q03518 808 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 CDC16Q13042 620 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 ZC3H12AQ5D1E8 599 aaKnown RBP16.48■□□□□ 0.23
MCF2L-232ENST00000535094 PPP1R2P3Q6NXS1 205 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 TRIM50Q86XT4 487 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 NAT8LQ8N9F0 302 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 STKLD1Q8NE28 680 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 MIPOL1Q8TD10 442 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 WNK4Q96J92 1243 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 DNAJC1Q96KC8 554 aaKnown RBP16.48■□□□□ 0.23
MCF2L-232ENST00000535094 TSNARE1Q96NA8 513 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 NDNQ99608 321 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 C17orf75Q9HAS0 396 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 DNAJC6O75061 913 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 RPS6KA3P51812 740 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 PRKD1Q15139 912 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-232ENST00000535094 HPS6Q86YV9 775 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 NIM1KQ8IY84 436 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 SLC35B2Q8TB61 432 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 USP13Q92995 863 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-232ENST00000535094 RNPEPQ9H4A4 650 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
MCF2L-232ENST00000535094 PNPOQ9NVS9 261 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 KCNK4Q9NYG8 393 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 PAK5Q9P286 719 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 PRKCBP05771 671 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 PEX2P28328 305 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 RAB6CQ53S08 254 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 IL31Q6EBC2 164 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 OR6Y1Q8NGX8 325 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 PPP2R3CQ969Q6 453 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 PTCD3Q96EY7 689 aaKnown RBP16.47■□□□□ 0.23
MCF2L-232ENST00000535094 MPP4Q96JB8 637 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 RAB6CQ9H0N0 254 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 TTLL13PA6NNM8 815 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 APOC4-APOC2K7ER74 178 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 APOC2P02655 101 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 STIP1P31948 543 aaKnown RBP16.47■□□□□ 0.23
MCF2L-232ENST00000535094 GTF2A2P52657 109 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 USP4Q13107 963 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 SHKBP1Q8TBC3 707 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 SREK1Q8WXA9 508 aaKnown RBP16.47■□□□□ 0.23
MCF2L-232ENST00000535094 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
MCF2L-232ENST00000535094 ST6GALNAC4Q9H4F1 302 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 ZNF536O15090 1300 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 ITGB3P05106 788 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 PYGLP06737 847 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 SDC4P31431 198 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 NUDT2P50583 147 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 CCNG1P51959 295 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 TAS1R3Q7RTX0 852 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 TNS4Q8IZW8 715 aa16.47■□□□□ 0.23
MCF2L-232ENST00000535094 WDR46O15213 610 aaKnown RBP16.46■□□□□ 0.23
MCF2L-232ENST00000535094 CXCL8P10145 99 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 GRIA1P42261 906 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 HEATR6Q6AI08 1181 aaKnown RBP16.46■□□□□ 0.23
MCF2L-232ENST00000535094 SESTD1Q86VW0 696 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 TRAPPC12Q8WVT3 735 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 OLFM3Q96PB7 478 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 EURLQ9NYK6 297 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 PLA2G4CQ9UP65 541 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 RREB1Q92766 1687 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 CAPN8A6NHC0 703 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 PEX1O43933 1283 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 TM7SF2O76062 418 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 TBL3Q12788 808 aaKnown RBP16.46■□□□□ 0.23
MCF2L-232ENST00000535094 SKA1Q96BD8 255 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
MCF2L-232ENST00000535094 FBXL18Q96ME1 805 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 KLHL4Q9C0H6 718 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 PLLPQ9Y342 182 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 DTNAQ9Y4J8 743 aa16.46■□□□□ 0.23
MCF2L-232ENST00000535094 WDR27A2RRH5 827 aa16.46■□□□□ 0.22
MCF2L-232ENST00000535094 NELFEP18615 380 aaKnown RBP16.46■□□□□ 0.22
MCF2L-232ENST00000535094 SLC1A6P48664 564 aa16.46■□□□□ 0.22
MCF2L-232ENST00000535094 AQP4P55087 323 aa16.46■□□□□ 0.22
MCF2L-232ENST00000535094 PKNOX1P55347 436 aa16.46■□□□□ 0.22
MCF2L-232ENST00000535094 CTC1Q2NKJ3 1217 aa16.46■□□□□ 0.22
MCF2L-232ENST00000535094 ARHGAP18Q8N392 663 aa16.46■□□□□ 0.22
MCF2L-232ENST00000535094 DCLK2Q8N568 766 aa16.46■□□□□ 0.22
MCF2L-232ENST00000535094 EZH1Q92800 747 aaPredicted RBP16.46■□□□□ 0.22
MCF2L-232ENST00000535094 TMA16Q96EY4 203 aaKnown RBP16.46■□□□□ 0.22
MCF2L-232ENST00000535094 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.22
MCF2L-232ENST00000535094 RTN3O95197 1032 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-232ENST00000535094 OATP04181 439 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 CSH1P0DML2 217 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 CSH2P0DML3 217 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 AMHR2Q16671 573 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 CNPY1Q3B7I2 92 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 LRRC38Q5VT99 294 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 NCAPG2Q86XI2 1143 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 SPATA31A6Q5VVP1 1343 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 ATP9BO43861 1147 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 OR6B1O95007 311 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 STAT5BP51692 787 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 ART3Q13508 389 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 LIN52Q52LA3 116 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 SATL1Q86VE3 508 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms