RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 GRIK1P39086 918 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 ALDH7A1P49419 539 aaKnown RBP24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 RABGGTBP53611 331 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 TFDP2Q14188 446 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 TRADDQ15628 312 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 VSTM1Q6UX27 236 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 DDX42Q86XP3 938 aaKnown RBP eCLIP24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 TMEM199Q8N511 208 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 VWCEQ96DN2 955 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 TRIM31Q9BZY9 425 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 HCSTQ9UBK5 93 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 PCDHB5Q9Y5E4 795 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 YJEFN3A6XGL0 299 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 E7ENQ6 273 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 CST8O60676 142 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 CD48P09326 243 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 OR4Q2P0C623 313 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 RDXP35241 583 aaKnown RBP24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 KRT17Q04695 432 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 BYSLQ13895 437 aaKnown RBP24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 DPYSL3Q14195 570 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 PSTKQ8IV42 348 aaKnown RBP24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 FAM129AQ9BZQ8 928 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 ABI2Q9NYB9 513 aaPredicted RBP24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 USP3Q9Y6I4 520 aa24.8■■□□□ 1.56
PTPMT1-205ENST00000534775 TRIM43BA6NCK2 446 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 TRIM66O15016 1216 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 CYP2F1P24903 491 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 MAGEA11P43364 429 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 SMARCB1Q12824 385 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 PTK6Q13882 451 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 HFE2Q6ZVN8 426 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 ANKS3Q6ZW76 656 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 BNIPLQ7Z465 357 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 FAM71BQ8TC56 605 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 TOP1MTQ969P6 601 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 TRIM43Q96BQ3 446 aaPredicted RBP24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 ZNF670Q9BS34 389 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 TTPALQ9BTX7 342 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 DRG1Q9Y295 367 aaKnown RBP24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 NT5C1B-RDH14C9J2C7 533 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 ECHS1P30084 290 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 MFSD5Q6N075 450 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 NKD2Q969F2 451 aaPredicted RBP24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 ADAM33Q9BZ11 813 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 PCDH18Q9HCL0 1135 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 AP4E1Q9UPM8 1137 aa24.79■■□□□ 1.56
PTPMT1-205ENST00000534775 APOC4-APOC2K7ER74 178 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 M0QYT0 321 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 APOC2P02655 101 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 NCAM1P13591 858 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 CSF2RAP15509 400 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 VCPP55072 806 aaKnown RBP24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 DYNLT1P63172 113 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 DEUP1Q05D60 604 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 DPYSL2Q16555 572 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 ZC3H12AQ5D1E8 599 aaKnown RBP24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 SYPL2Q5VXT5 272 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 ZNF365Q70YC5 407 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 BEND5Q7L4P6 421 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 BHLHA9Q7RTU4 235 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 CCHCR1Q8TD31 782 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 C8orf48Q96LL4 319 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 GDAP1L1Q96MZ0 367 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 CWH43Q9H720 699 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 NAALADL1Q9UQQ1 740 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 SNX24Q9Y343 169 aa24.78■■□□□ 1.56
PTPMT1-205ENST00000534775 CARNS1A5YM72 827 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 FYNP06241 537 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 SLC5A3P53794 718 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 AIF1P55008 147 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 GPS2Q13227 327 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 GSTA5Q7RTV2 222 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 SCN4BQ8IWT1 228 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 PGAP3Q96FM1 320 aaPredicted RBP24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 RNF157Q96PX1 679 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 SLC9A7Q96T83 725 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 FAM118BQ9BPY3 351 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 GPATCH2LQ9NWQ4 482 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 OGFRQ9NZT2 677 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 ASIC3Q9UHC3 531 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 DNPEPQ9ULA0 475 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 ZNF148Q9UQR1 794 aa24.77■■□□□ 1.56
PTPMT1-205ENST00000534775 TNFRSF10BO14763 440 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 BAIAP3O94812 1187 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 F9P00740 461 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 ITGAVP06756 1048 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 FAM153BP0C7A2 387 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 CPB1P15086 417 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 PBX3P40426 434 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 RPL21P46778 160 aaKnown RBP24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 ATXN1P54253 815 aaKnown RBP24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 FAM153CQ494X1 144 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 OTUD1Q5VV17 481 aaPredicted RBP24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 MREGQ8N565 214 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 CCDC89Q8N998 374 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 SLC35B2Q8TB61 432 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 SLC7A14Q8TBB6 771 aa24.76■■□□□ 1.55
PTPMT1-205ENST00000534775 C2orf15Q8WU43 125 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms