RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 HEXIM2Q96MH2 286 aaKnown RBP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 GTPBP4Q9BZE4 634 aaKnown RBP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 NIF3L1Q9GZT8 377 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 IRF2BPLQ9H1B7 796 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 EBF3Q9H4W6 596 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 LMAN1LQ9HAT1 526 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 TMEM30AQ9NV96 361 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 SMPD4Q9NXE4 827 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 ARMCX3Q9UH62 379 aaPredicted RBP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 CHORDC1Q9UHD1 332 aaPredicted RBP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 ZNF318Q5VUA4 2279 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 ZDBF2Q9HCK1 2354 aa9.46□□□□□ -0.89
CCDC90B-219ENST00000534753 SPECC1L-ADORA2AF8WAN1 911 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 SLC16A3O15427 465 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 LAMTOR5O43504 91 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 FZD6O60353 706 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 ARSAP15289 507 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 RHOQP17081 205 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 YWHAQP27348 245 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 GTF2H1P32780 548 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 UBE2HP62256 183 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 CSTF1Q05048 431 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 LRRC63Q05C16 580 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 FCHO2Q0JRZ9 810 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 POU4F2Q12837 409 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 PON2Q15165 354 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 ITPRIPL2Q3MIP1 535 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 CBWD6Q4V339 395 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 CBWD3Q5JTY5 395 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 CBWD5Q5RIA9 395 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 PRICKLE2Q7Z3G6 844 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 ETFBKMTQ8IXQ9 262 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 FUKQ8N0W3 1084 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 SCAMP5Q8TAC9 235 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 SPATA20Q8TB22 786 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 SH3RF2Q8TEC5 729 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 SMARCD1Q96GM5 515 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 MYRFLQ96LU7 910 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 SLITRK1Q96PX8 696 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 TWNKQ96RR1 684 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 NELL2Q99435 816 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 DDX23Q9BUQ8 820 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 DNAI2Q9GZS0 605 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 NACA2Q9H009 215 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 DMAP1Q9NPF5 467 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 RBM12Q9NTZ6 932 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 RAB20Q9NX57 234 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 DUS2Q9NX74 493 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 EHD2Q9NZN4 543 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 ZMYM5Q9UJ78 669 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 WNT6Q9Y6F9 365 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 R4GN57 208 aa9.46□□□□□ -0.9
CCDC90B-219ENST00000534753 BICDL2A1A5D9 508 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 BEST1O76090 585 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 RTN3O95197 1032 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 FAM200BP0CF97 657 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 MBL2P11226 248 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 BMP6P22004 513 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 GPC1P35052 558 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 IFNAR2P48551 515 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 SLC5A3P53794 718 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 RUNX3Q13761 415 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 MORC3Q14149 939 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 MTF1Q14872 753 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 COBLL1Q53SF7 1204 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 MRPL14Q6P1L8 145 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 TSSK4Q6SA08 328 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 PAQR9Q6ZVX9 377 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 UNC93AQ86WB7 457 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 RIN3Q8TB24 985 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 RNF217Q8TC41 542 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 CYFIP2Q96F07 1278 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 SMOQ99835 787 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 DUSP9Q99956 384 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 SRRTQ9BXP5 876 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 RNF38Q9H0F5 515 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 C8orf33Q9H7E9 229 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 KIF9Q9HAQ2 790 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 CYP3A43Q9HB55 503 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 OBP2AQ9NY56 170 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 DLGAP2Q9P1A6 1054 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 MUC6Q6W4X9 2439 aa9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 NUP210Q8TEM1 1887 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-219ENST00000534753 ZNF638Q14966 1978 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 ZNF840PA6NDX5 716 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 LEFTY2O00292 366 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 ARNTLO00327 626 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 GFRA3O60609 400 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 CILPO75339 1184 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 SP9P0CG40 484 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 IRF1P10914 325 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 CD19P15391 556 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 ACO1P21399 889 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 PPP1R2P41236 205 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 PDE6CP51160 858 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 MTAPQ13126 283 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 PAK1Q13153 545 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 TXNDC11Q6PKC3 985 aa9.44□□□□□ -0.9
CCDC90B-219ENST00000534753 FILIP1Q7Z7B0 1213 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms